Polyodon spathula (Mississippi paddlefish): 121307692
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Entry
121307692 CDS
T07273
Name
(RefSeq) transient receptor potential cation channel subfamily V member 4-like
KO
K04973
transient receptor potential cation channel subfamily V member 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
121307692
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121307692
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121307692
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ion_trans
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
121307692
NCBI-ProteinID:
XP_041095867
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Position
58:complement(709760..727037)
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AA seq
845 aa
AA seq
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MTMTDPEEPPNVAGLGSGDAGDPQPENDSSFPLSSLANLFEGEETAPLPEPHPGETRQNL
RIRFQDAFKKGISNPKDLLESYESPVAAAPKKAPMDSLFDYGSYRQPNANKRQRKKLLCD
VSSVKDLAQDPPPVLKMFTRLLLFDAVSRGNTSDLQGLLPFLLAHKKQLTDEEFREPSTG
KTCLPKALLNLYSGCNDTIPLLVEIAEKTGNLREFINTPFRDLYYRGQTALHIAIERRCK
QYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPDMVHYLVQNAHKT
ADLRRQDSRGNTVLHALVHIADNTRENTRFLTKMYDLLLIKCAKLYPDCNLETVLNNYGM
SPLMMAAKLGKIEVFQHIIRREITDESARHLSRKFKDWAYGPVYSSLYDLSSLDTCGEEV
SVLEILVYDSCVENRHEMLAVEPINELLRDKWQKFGAASFYISVVSYLVSMVIFTLVAYY
RPSEGKPPYRYQSSTDYLRLAGECITLFTGVVFFLTNIKDLFLKKCPEFSSLLMEGSFQL
LYFIYSVLVLVTAALYLSGINAYVSVMALALVLGWMNTLYFTRGLKLTGTYSIMLQKILF
KDLFRFLLVYLLFMIGYASALVSLLNVCPSSDTPCPGGQCPTYPLCRDNTTFSTFLLDLF
KLTIGIGDLDMINSTQYPAVFLTLLVTYIILTFVLLLNMLIALMGETVGKVSKESKKIWK
LQWATTILDIERSFPVCLRKKFRSGEMVTVGKGFDGTPDRRWCFRVDEVNWSHWNQNLGI
INEDPGKNETYQYDGMPTSMKGLRRDRWSSVIPRVVELHKSPRSEEAVMVEMDPLLQGKR
KTIDT
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgacagacccggaagaaccccctaacgttgcaggcttaggttcgggggacgca
ggagacccccagcctgagaacgactcctcgttcccgctgtcctccctggccaatctcttt
gagggggaggagaccgcccccttgcctgagccccaccccggagagacccggcagaaccta
cgaatccgcttccaggatgccttcaagaagggcatctccaaccccaaggacctgctggag
tcctacgagtcgccagtggccgctgcacccaagaaagcccccatggattccctcttcgac
tatggcagctaccggcagcccaacgccaacaagcgccagaggaaaaagctgctgtgcgat
gtctccagtgtaaaggatcttgcccaagacccccctccggtgctcaagatgtttacgcgg
ttgctgctgttcgacgcagtgtcacggggaaatacctccgaccttcaggggctgcttccc
ttcctgctggcacacaagaaacaactaactgacgaggagttcagagagccatcgactggg
aagacctgcctgcccaaagccctgctcaacctctacagcggctgcaatgacaccatccct
ctgctggtggaaatcgccgagaaaacgggcaacctgcgagagttcatcaacacccccttc
agagatctctactaccggggtcagaccgctctccacattgccatcgagagacgctgcaag
cagtacgtggagctgctggtggagaagggggctgacgttcacgcgcaggccaggggacgc
ttcttccagcccaaggacgagggtggatacttctacttcggtgagcttcctctatccctg
gcggcctgcactaaccagcctgacatggtccactacctggtccagaacgcacacaagacg
gcggacctgcggcggcaggactcccgcgggaacacggttctgcacgctctggtgcacatc
gctgacaacacgcgggagaacacgcgcttcctcaccaagatgtacgacttgctgctcatc
aagtgcgccaagctctacccagactgcaacctggagaccgtgctcaacaactacggcatg
tccccactcatgatggcagccaagctgggcaagatcgaggtgttccagcacatcatccga
cgggagatcacggacgagagcgctcggcacctctccaggaagttcaaggactgggcgtac
ggaccggtctactcctccctgtatgatctctcctcgctggacacctgtggggaggaggtg
tctgtgctggagatcctggtctacgacagctgtgtcgagaaccgtcacgagatgttggcg
gtggagccaatcaatgagctcctgagggataagtggcagaagttcggcgctgcctccttc
tacatcagcgtggtgtcctacctggtttccatggtgatctttactctggttgcgtactat
cgaccctcagagggcaagcccccctaccggtaccagagcagcacagactacctgcgcctg
gcgggagagtgcatcaccctgttcactggagtcgtcttcttcctcaccaacattaaggat
ctgttcctcaagaagtgtccggagttcagctccttgcttatggaagggtcctttcagctg
ctttattttatctactccgtgctggtgctagtgacggcagcgctctacctgtctgggatc
aatgcctatgtgtcagtgatggcgttggcgctggtgctgggctggatgaacacactctac
tttaccagaggactgaaactcaccgggacctacagcatcatgctgcagaagattctcttt
aaggacctcttccggttcctgctggtctacttactcttcatgatcggatacgcttcagcc
ctggtgtccctcctgaacgtgtgccccagctctgacacgccctgcccagggggacagtgc
cccacgtaccccctgtgccgtgacaacaccaccttcagcaccttcctcctggacctcttc
aagctgaccatcggcattggtgacctggacatgatcaacagcacccagtaccccgcggtc
ttcctcaccctgcttgtcacctacatcatcctcaccttcgtgctgctgctcaacatgttg
atcgctctgatgggggagacggtgggaaaggtgtccaaggagagcaagaagatctggaag
ctccagtgggccacgaccatcctggacatcgagcgctccttcccagtgtgtctgcggaag
aagttccgctcgggggagatggtcacggtgggcaaaggcttcgacgggacccccgaccgg
agatggtgcttcagggtggatgaggtgaactggtctcactggaaccagaaccttggcatc
atcaatgaggacccagggaagaacgagacgtaccagtacgatggcatgccgaccagcatg
aaggggctccgcagagaccgctggtcctcggtgatcccacgtgtggtggagctccacaag
agccctcgctcggaggaggcggtgatggtggagatggaccccttgttacagggcaaacgg
aaaactatagacacctag
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