Polyodon spathula (Mississippi paddlefish): 121307799
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Entry
121307799 CDS
T07273
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121307799
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
121307799
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Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
121307799
NCBI-ProteinID:
XP_041096012
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Position
59:complement(228826..237270)
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AA seq
435 aa
AA seq
DB search
MGDRCRNMRLREWLIAQIDSGNYAGLSWENQEKNMFRIPWKHAAKQDYNQDEDAALFKAW
AVYKGKFCEGKDKADPSTWKTRLRCAMNKSTDFKEVPERSQLDISEPYKVYEIMDEGEKK
TDPPDSPVPPAQRIYNRSQHALQRGPHALQAQFPMQVDGEWEKVTEKPSMQYKAAAPLKP
ADNNRHVKGTFYTYTTPGTQAPEKAQSFQAAPRPYPTQLQISDFRVNVCLYYQGTLVENF
TTSTMDGCRILHGSVPVENEHIYGPSSMEQLRFPSPERAGADKWVVEAMSRLLPHLERGV
LLWVAPDGVFLKRLCQGRVYWDGPLAPFCNQPNKLERDKTCKLLDMQLFLQELELYMREG
RPCPRFHIDLCFGEEFPDPPQHKSKKLITAHIEPLFARELYRKAQQIGPRTLHSLQLPKT
NTDDRPHIIAKYPVQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcgttgcaggaacatgcggttacgagagtggctgattgctcagatagacagc
ggtaattatgcagggctgagttgggagaaccaagaaaaaaacatgtttcggattccttgg
aaacacgcagctaaacaagactacaaccaggacgaggatgccgctctgttcaaggcctgg
gcggtgtacaagggcaaattctgcgaagggaaggacaaggccgacccctctacctggaag
acacggcttcgctgtgcaatgaacaagagcaccgacttcaaggaggttccggagcgaagc
cagctggacatctccgagccgtacaaggtgtacgagatcatggacgagggggagaagaag
acagacccacctgatagtccagtgcccccagcccagcggatctataacaggagccagcac
gcgctccagaggggtccccatgctctgcaggctcagttccccatgcaggttgatggtgaa
tgggagaaggtgactgagaagcccagtatgcagtacaaggctgccgccccactcaaacct
gcagacaataacagacatgtgaagggaacgttttatacatatacaacacctggaacccag
gcacctgagaaagcccagagcttccaggcagcaccgcgcccctacccaacacagctccag
atatcagatttccgcgtgaacgtgtgcctatactaccagggcacgctggtagagaacttc
acgaccagcacgatggatggctgccggatcctgcatggctcggtgcccgtggagaacgag
cacatctacggcccatccagcatggagcagctgcgcttcccctcaccggagagagccggg
gctgacaagtgggtcgtcgaggccatgagccgcctgctcccccacctggagaggggtgtc
ctgctgtgggtggccccagacggggtcttcctcaagcgcctctgccagggccgggtctac
tgggatgggccccttgccccgttctgcaaccagcccaacaaactggagcgcgacaagacc
tgcaaactgctggacatgcagctcttccttcaagagctggagctgtacatgcgagaaggt
cgtccgtgtccccgcttccacattgacctgtgcttcggagaggagttccctgacccgcca
caacacaagtccaagaaactcatcactgcacacatcgagcccctgtttgccagagagctg
tacaggaaggcccagcagattggtccaaggactctgcacagcctccagttacccaagacc
aacacagatgataggccccacatcatcgccaagtacccggtgcagtga
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