Polyodon spathula (Mississippi paddlefish): 121307818
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Entry
121307818 CDS
T07273
Name
(RefSeq) POU domain, class 6, transcription factor 2-like
KO
K09368
POU domain transcription factor, class 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121307818
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121307818
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HOCHOB
FtsX_ECD
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
121307818
NCBI-ProteinID:
XP_041096039
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Position
3:complement(16449646..16563959)
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AA seq
650 aa
AA seq
DB search
MITGQFSKPLLSLRSEMNAELRGEDKADTSDNELNESLLAPAEPNDSEDTPSKLFGARGN
TVQLETGSSVADQHQPSQSHPAFPVGPQSLLAAQQLASAVAGVMPGGAPGLNQPILIPFN
MAGQLGGQQGLVLTLPTANLANIQGLVAAAAAGGIMTLPLQNLQATSSLNSQLQHLQQLQ
QLQQHQQQHQGQQLQQHQQQHQGQQQQQQTNQQSCHSQPQSAAASPQQKQSQSPGQGLPS
PLTSPSPLQLNPLASQAAAAAAAAALGSIAGSQAFGNALSSLQGVTGQLVTNAQGQIIGT
IPLIPNPAMPSSQTGGVTQGLQMQPITPQLLTNAQGQIIATVIGNQILPVINTQGITLSP
IKPGQQLPQQTQVGPASSQAGLLHLTHNQASMSQSPVRQASSSSSSSSTSSSSSALSVGQ
LVSNPQTAPSEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICR
HTILRSHFFLPQEAQENTIASSLTAKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAE
AEARHRSGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNSHFEKNTHPSGQEMTEIAEKL
NYDREVVRVWFCNKRQALKNTVKRLKQHEPGSLVSMEPLTDSLEEHSLNN
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgattactggacagttcagtaagcccttgctgtctctccggagtgagatgaacgcggag
ttgagaggtgaggacaaagcggacacttcagacaatgagctgaatgagtctctgcttgcg
cccgcagaaccaaatgacagcgaggacactcccagcaagctctttggggccagagggaac
acagtgcagttggaaactggcagcagcgtagctgaccagcatcagccaagccaatcacac
ccagcctttcctgtcggcccacagtcgttgttggcagcacaacagttggcatcagctgtg
gcaggggtgatgcccgggggagctccaggcctcaatcagccaatcctcattcccttcaac
atggccgggcagctgggcgggcagcaggggctagtgctgacactgcccaccgccaacctg
gccaacatccaaggcctggtggcagcagcagcagctggaggcattatgacgttaccactc
caaaaccttcaagctacctcatccctgaactcacagctccagcatctgcaacaactacaa
cagctacagcagcaccaacagcaacaccaagggcaacagctacagcaacaccagcagcaa
caccaaggacaacagcagcagcagcagacaaaccaacagtcgtgccacagtcagcctcag
tctgctgcagcctccccacagcagaaacagagccagtcaccaggacaggggctcccgtct
cctctcacatcacccagtcccctccagctcaatccactggccagccaggccgcagcagca
gcagcagcagcagccttggggtctatagccggctctcaggccttcggaaatgcactgtcc
agtcttcagggggtcacaggacaactggtcactaatgcacaaggacagattattggaaca
attccactgatacctaatccagccatgccatcaagtcagacaggaggtgtaacgcagggc
cttcagatgcagccaatcacccctcagctgctgacaaacgcccaaggccagattattgcc
acggtcatcgggaaccagatcctacccgttatcaacacccagggaataacattgtcgccc
atcaagccaggccaacagctgccccagcagacacaggtaggtccagcatcgtcacaggcc
ggccttctccacttgacacacaaccaggcctccatgtctcagagcccagtgcgccaggcc
tcctcctcctcctcttcctcctccacatcgtcctcttcatcagctctcagtgttggacaa
ctggtcagcaaccctcagacagcccccagtgaagttgacggagtaaatctggaagaaatt
cgagagtttgccaaagcttttaaaatccgccgcctgtcccttgggctgacacagacacaa
gttgggcaagctttaagtgccacagaaggcccagcatacagccagtctgccatctgcaga
cacaccatcctgagaagccactttttcctaccacaggaagcccaagagaacactatagct
agcagtctgacagccaaactgaaccctggccttttatatcctgccaggttcgagaagctg
gacatcacccctaaaagcgcccagaagataaagcccgttcttgagcgatggatggctgag
gcagaagcccgccaccgctccggaatgcagaacctcaccgaatttatcggcagtgagcct
tctaaaaagcgcaagaggcggacatcgttcaccccgcaagctctggagattttgaattcc
cactttgagaagaatacacacccctcggggcaggaaatgacagaaatagctgaaaaactg
aactacgaccgggaagtggtccgtgtctggttttgcaacaagaggcaggcgctgaaaaac
acagtgaagcgtttgaaacaacacgagccaggatcattggtgtcaatggagcctttgaca
gactctttggaagagcattctttaaacaattga
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