Polyodon spathula (Mississippi paddlefish): 121307823
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Entry
121307823 CDS
T07273
Symbol
si:dkey-11f4.7
Name
(RefSeq) LOW QUALITY PROTEIN: piezo-type mechanosensitive ion channel component 2
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121307823 (si:dkey-11f4.7)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121307823 (si:dkey-11f4.7)
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121307823 (si:dkey-11f4.7)
Ion channels [BR:
pspa04040
]
Other channels
Mechanosensitive channel (Piezo)
121307823 (si:dkey-11f4.7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
THU_Piezo1
Piezo_cap
COPIIcoated_ERV
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
121307823
NCBI-ProteinID:
XP_041096041
LinkDB
All DBs
Position
59:complement(811794..838428)
Genome browser
AA seq
2633 aa
AA seq
DB search
MAPTRPLSKGNTGTFLQSICFTSITFLALQAGFQITFTYVPRDVDNIWEKVLHHIGIVRL
SEVGGWNTVRLLAPDLGMFLAGVVIYRLCKKLVRPREPFTAHDNDNMQPDDEEMDTEESV
EETEESTYSTTEETKEPENRRPKFILKILTFLGGLQLLLGEILNSAGKVVVTILLGLAGI
TVPSLTSGLYFFTFLAVVSWWSCCRTISLVLFSSLCVMMAIFSMGHLVGLYLYQLQLFQD
LVPPHDIYARLFGMTALIQTNASEPSRLQLHAGVTWPVFLNPLVLLVLYFTLVALLQKWV
YITEEVTLPKCDSKHTNGAHNLGRMMWTSGNDMKKVTNVKKCFAFGEDRLLASMDEEINS
HEQVTYVPNGNCQDSAGLRSVPPLNNQEQHAGGFTPPIYLSTGKSAAGGFTPPIYLSTGK
SAAGGFTPPIYLSTGKSAAGSFTSPIYLSTEEDANEEDEDKEESSEGDAETPWSHTTESR
GLVAFTQFIMKQSYVSALIVMMTWSITYNSWLTLMLLIWSCVIWTLRDRRRYALLSSPFL
VLYGNVLVICNFFTGLMLSQDELFPGIPDPVLQDLDLKLXWGGDTRVTYNFTFCLLLRQH
LTEKKALETLREEPLVEVKVSEAGQDESRLAVMEVLGSLIKGMLVKYWIYFCCSMFFVVS
FSGKVVVYKILYIMLFLFCTALYQVRYDLWRRVLKYFWIVVVAYSMVVLIVIYIYQFKTI
SGLFRQTIGMSEEGLRDLGLEQYDTVELFARILLPSSFLLACILQLHYFNNDFLMLTDLS
SIPVREGPSREDKIKVKVCVIATRFGAEQLSGRSEDTLDRVGLSELDRPGDASGEAQDLH
ASSVSEEGVLTKWGQVVDRVTLLVLKALRMLHRAQVTVWRLLELHIIKIISTAIIWITLT
EVSLMNYLFMVLWTFALPFPRLRPLASSISTVWACVMIVCKMMYQLKFLRPHEYSSNCTA
KLLPVNWSHTQTNLEELLRESVLYMAPVDPAEWCGGLRKCAESSLPCLRNHLAILALLAF
EVTVHRHQLYYQLHNALKQSETNTLFEGITRQHLDDGMVSCMKYFINYFFYKFGLEVCSV
VAVNVIGQRMDFYAMLHSFALIAVLSRRRRKSIAEIWPKYCCFTASLMTFQYLLCIGIPP
ALCRDYPWRTGSTPLNSNLIKWLYLPDFARRPNPVFLIYDHMLLLCASLQWQVFEDENTA
AVRLLAGDNVEISRSLDPRTLSQYIPVPDFIHCRSYLDIVKMFVFSYFFWFVLSLIFITG
TTRINIFCMGYLISCFYFMLFGGSLLLKPVRHILKLWDLLIGYTVLVITMKNILSLGACA
YLHSLLKNSCWFIQTFSMVCTIKEYDVPSPDDDCELPEGEAGIIWDAICFTFLLAQRRVF
VSYYFLYIVADLKTSKILASRGAELFEAKVKKGIAARLELEKKSMQLLKKQMEKIKMKQR
KTQDGKAIAPAQGVLPELEEEAQQERESQTQGDGEKRNQSEKKKWWQPWVNHTSMIRSGS
YYLFESDSEDDEDEQEEKEEEAPKKKTSLQLAYEAWSTSSKAALKVRKEEEAALRNEQKK
KAKLERQRQQGMESAELSEDELNQTTEDDEVVEEEENVIQRIIDTVKFAWVFILSLTDDL
IEGLNSFCKDYLDIAKVLRFERAMLGQQLKKGKLASQDTVQEFYRARLSQQATLESPAQE
EKVTPSPSSWGYQKVVSSDSKLSWGSSLSSCLTEVITLDSRQPPPDDLEEPSAPPVSPPP
RASDHLCRKLLKTANFDMSSIDSESVLLCGHTGMIAEDEDDEEDAERLQDRIKFQDPFPA
SFDGLGPCPVLGETLDEIDMEGPRPLTQETRTLTASELLLNKVFQDEVMEQSERFFQDLP
RPLRVFLALYNTMVCKSEMLSYFVIILNHMVSACILSLVLPILIFLWAMLSVPRPTKRFW
MTAIIYTEIIVFVKYLFQFGFFPWTTTAYRGINADRPFALPNIVGVEKKDGYVLFDLVQL
LALFFHRSILKCHGLWDNKEVDMPDFLKKLKRKKEKRREPAKDEDKYRDGTSPFVYLQGS
RGLGFRRRKREGDHTEGTEPPKRKKSLKNRHTTRKGIIKEKIKEKMLEAKSKSIEIALQV
YLPVRQFFYDIIHPEYSPVCDVYALMFLVDVINFIIIIFGYWAFGKYGAAADITESLSED
QVPEAFLVMLLIQFGTMIVDRALYLRKTLLGKCVFQVVLVFGIHFWMFFILPGVTERRFN
QNQVAQLWYFVKCVYFGLSAYQIKCGYPNRVLGNFLTKSYNYLNLFLFQGFRMVPFLTEL
RAVMDWVWTDTTLSLSSWICVEDIYANIFILRCWRESEKKYPQPSGQKKKMIVKYGMGGL
IIFSLISIIWFPLLFMSLVKSVAGVTNQPLDVSIHLSIGGYEPLFTMSAQQQNLAPYSQS
AFNQMTNLFATNPSAMQFIVNYMPEDIVTAKIKTDASLLWSISPASREAMIEELSNSTHI
YITLQWTILRNVSLVMNAETVGKHTVKYEDKEMRDQIVQMLRGTRKEPVIIKSLLPKYIR
APSGPEAKIINRLYVGKQPSKSKVVKTNQFSVTRHEKRANGLVGDQGLPGVFVLYELSPM
MVRFTERQRSFTHFLTGVCAIVGGVFTVAGLVDSLIYHSARAIQKKIELGKAS
NT seq
7902 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaccagacccctgagcaaaggaaacacagggacattcctgcaatccatatgc
tttacgagcatcaccttcctggctttacaagcaggattccaaatcaccttcacctacgtc
ccacgagacgtggacaatatttgggaaaaagtacttcaccacataggaattgtacgactg
agcgaggtgggtggctggaatacagtgcggctcctggctccagacttggggatgttcctt
gcaggggttgtgatatacaggctgtgcaagaagctggtgagacccagggaacccttcaca
gctcatgacaacgacaacatgcagcctgacgacgaggagatggatacagaggaaagtgtt
gaggagacagaggagtcgacctacagcaccacagaggagacaaaagagcccgaaaacaga
agaccaaagtttatcctgaagatccttaccttcctaggaggacttcagttattactggga
gagatccttaactcagctgggaaggttgtggtgacgattctgcttggattagcaggtata
acggtgccctcgctgacgtctggattgtacttcttcaccttcctggccgtggtgtcatgg
tggtcctgctgcaggaccatcagcttggtgctgttcagcagcctatgtgtcatgatggct
atcttcagcatggggcacctggtggggctctacctgtaccagctgcagctcttccaggac
ctcgtgcctcctcacgacatctacgccaggttgtttggaatgacggcgctcatccagacg
aacgcctccgaaccctccaggctgcagctgcacgctggggtgacctggcccgtgtttctg
aaccccctggtgttgctggttctgtatttcacccttgtcgctctgctccagaagtgggtc
tacatcactgaggaggtcaccctgccaaagtgtgacagcaaacacaccaacggagcccac
aatctgggcaggatgatgtggacttcggggaacgacatgaaaaaagtaaccaatgtcaag
aagtgttttgcctttggagaggacagacttcttgctagcatggatgaggagataaactca
catgagcaggtgacatatgtgccgaatggtaactgtcaggactcggctgggctgaggtca
gttcccccgttgaataaccaagagcaacatgctggcggcttcacccctcccatatacctg
agcacaggtaagagtgctgctggtggcttcacccctcccatatacctgagcacaggtaag
agtgctgctggtggcttcacccctcccatatacctgagcacaggtaagagtgctgctggc
agcttcacctctcccatatacctgagcacagaggaggatgcaaatgaggaggatgaggat
aaagaggagagctctgagggcgacgcagagactccctggagccacacgactgagtccaga
gggctggtggcattcactcagttcatcatgaagcagagctatgtcagcgcgctgatcgtc
atgatgacctggagcatcacctacaacagctggctcaccttgatgctgctgatctggtcc
tgcgtgatctggacgctgcgagaccgccggcgttatgccttgctcagctccccgttcctg
gtgctctacggcaacgtgctggtcatctgcaacttcttcaccgggctgatgctgagtcag
gacgagctgttcccagggatcccggaccccgtgctccaggacttggacctgaagctgtaa
tgggggggggacacacgtgtcacttacaactttaccttctgtttgttgctacggcaacac
ctgaccgaaaagaaggcgctggagactctgagggaggagccactggttgaggtgaaagtg
tcagaggcagggcaggatgagagcaggttggctgtgatggaggtcctgggctcactgatc
aaagggatgctggtcaagtactggatttacttctgctgctccatgttcttcgttgtcagc
ttctccgggaaagtggtggtctacaaaatcctctacatcatgctattcctcttctgcaca
gccctgtatcaggtgcgctatgacctgtggcgacgggtgctgaagtatttctggatcgtt
gtggtggcctattccatggtcgttctgatcgtcatctacatttaccagtttaaaacaatc
tccgggctcttccgacagaccattggcatgtctgaggaggggttgagggatctgggtctg
gagcagtatgacacagtagagctatttgcccggatcctgctgccctcctccttcctgctc
gcctgcattctccaactgcactacttcaacaacgacttcctgatgctgaccgacctgagc
agcatccccgtcagggaggggccctcccgtgaagacaaaatcaaagtgaaagtgtgtgtg
atcgcaacaaggtttggggcagaacagctgagtggccggagtgaagatactctggaccgg
gtcggtctgtctgagctggacaggccgggggatgccagcggagaggcacaagacttacac
gcttcctctgtttctgaagagggcgttctcaccaagtgggggcaggtggtggacagggtg
accctgctggtgctgaaggctttgaggatgctgcacagagcacaggtgacggtgtggaga
ctcctggagctgcacatcatcaagatcatctccaccgccatcatctggatcacgcttaca
gaggtctccttgatgaattacctcttcatggtcttgtggacgttcgccttgcccttcccg
aggctccgtcccctggcatccagcatctccacagtgtgggcctgtgtcatgattgtctgt
aagatgatgtaccagctgaagttcctccggccgcacgagtactcctcgaactgcaccgca
aagctgctgcctgtgaactggagccacactcaaacaaacctggaggagctgctgagggag
tctgtgctgtacatggcgcctgtggaccctgccgaatggtgtggggggctgaggaagtgc
gcagagagcagcctgccctgcctacggaatcacctcgccatcctggctctgctggcattc
gaggtgaccgtgcaccgccaccagctctactaccagctccacaacgctctgaaacagtcc
gaaacgaataccctgtttgagggcatcactcggcagcacctggacgacgggatggtcagc
tgcatgaaatacttcatcaactacttcttctacaagtttggactggaggtgtgctccgtg
gtggcagtgaacgtgattggacagcggatggatttctatgccatgctccactccttcgcc
ctgatcgccgtgctctccagacgcaggaggaagtccatcgctgagatctggcccaaatac
tgctgcttcactgctagtctcatgaccttccagtacctgctgtgcatcggcatccctcct
gcactctgcagagattacccctggaggaccggcagtacaccactgaactccaatctgatt
aaatggctctacctgccagacttcgccaggaggccaaaccccgtctttttaatatatgac
cacatgctgctgctgtgcgcctctctgcagtggcaggtcttcgaggacgagaacacagca
gccgtgcgccttctggccggtgacaacgtggagatcagccgcagcctggacccccggacc
ctcagccagtacatccccgtcccagacttcatacactgcagatcttatcttgacatcgtc
aagatgttcgtgttcagctacttcttctggtttgtgctcagcctgatcttcatcacgggc
accacacggatcaacatcttctgcatgggctacctgatctcctgcttctacttcatgctt
ttcggaggaagcctgctgctcaagccggtccgacacatcctgaagctgtgggatcttctc
atcggttacacggtcctggtcatcaccatgaagaacatcctgtctctgggagcctgtgcc
tatctgcacagcttgctgaagaacagctgctggttcattcagacgttcagtatggtctgc
actataaaagagtatgatgtcccctcccccgatgatgattgtgagctcccagagggcgag
gcagggatcatctgggacgctatctgcttcaccttcctcctggcccagaggagggtcttc
gtcagctactacttcctttacatagtggctgatctgaagacctccaagatcctagcttcc
aggggtgccgagctgtttgaagccaaggtgaagaaggggattgcagcgaggctggagctg
gagaagaaatccatgcaattgctgaagaaacagatggagaagattaaaatgaaacagagg
aagactcaggacgggaaagccatcgctccagcacagggggtcctgccagagctggaggaa
gaagctcaacaagagagggagtcgcagactcagggtgacggtgaaaagaggaaccagagt
gaaaagaagaaatggtggcagccatgggtgaaccacacctccatgatccgcagtggcagc
tactacctctttgagagtgacagcgaggatgatgaagatgaacaggaagagaaggaggaa
gaagcccccaaaaagaaaacaagcttgcagttggcttacgaagcctggtccaccagctcg
aaagctgctctgaaggtcaggaaagaagaagaggcggctctgaggaatgagcagaagaag
aaagcaaaactggagaggcagcggcaacaaggcatggagtcggcagagttaagtgaagat
gagctcaatcaaaccactgaggatgacgaggtcgtggaagaggaagagaatgtgatccag
cgtatcatagacacagtgaagtttgcctgggtcttcattctgtctctcactgatgacctg
attgaagggctgaactccttctgtaaagactacctggacatcgccaaagtgttacgattt
gagcgtgccatgctggggcaacaactgaaaaaagggaaactggcatcacaggacactgtc
caggagttttacagggccaggttatcgcagcaggcaactctagagtcacctgctcaggag
gaaaaggtgaccccctcaccgtcttcttggggttaccagaaagtggtcagctccgactca
aagctctcctggggaagcagtttgtccagctgccttacggaagtaatcaccctcgactca
cggcagccccccccggatgacctggaggagccctctgcccctcctgtttcgcccccaccc
agggccagcgaccacctctgcagaaagctcctcaagaccgcgaacttcgacatgtcttcc
attgacagcgagagcgtgcttttatgtggccacacaggaatgattgcagaggacgaggat
gacgaggaggacgcagagaggcttcaggaccggatcaagtttcaggatcccttccctgcc
tcgttcgatgggctgggaccatgcccagtgcttggggagaccctggacgagatcgacatg
gaggggcccaggccgctcacgcaggagacacgcaccctgaccgccagcgagctgctgctc
aacaaggtgttccaggatgaagtgatggagcagtcggaaaggttcttccaggacctgcct
cggccgctcagggtgttcctcgccctctacaacactatggtgtgcaagtccgagatgctg
agctactttgtcatcatcctgaaccacatggtgtcggcctgcatcctgtcactggtgctg
cccatcctcatcttcctctgggccatgctgtctgtgccccgccccaccaagcgcttctgg
atgacagccattatctacactgagatcatcgtgtttgtgaagtacctctttcagttcggg
ttcttcccctggaccaccaccgcctacagagggatcaacgcggaccggcccttcgctctc
ccgaacattgtcggggtggagaagaaggacggctacgtgctgtttgatctggtgcagctg
ctcgccttgttcttccacaggtccattctgaagtgtcacggcctgtgggacaataaggag
gttgacatgccagactttctcaaaaagttaaagcggaagaaagagaagagacgagagcct
gccaaggatgaagacaagtacagagacggcacttcacccttcgtctacctccagggctcc
agaggactgggcttcaggaggcgtaagagagagggagaccacacagaggggaccgagcct
cccaaaagaaaaaaatctctgaaaaacagacacacaaccagaaagggaataatcaaggaa
aagatcaaggagaagatgctggaggctaaatccaagtctatagaaatagcgctccaggtc
tacctgccggtacgacagttcttctatgacatcatccaccctgaatacagcccggtgtgc
gacgtctacgccctcatgttccttgttgatgtcattaacttcattatcatcattttcgga
tactgggcgtttgggaagtacggcgcggcggcagacatcacagagtccctgtcagaggac
caggtccccgaagccttcctggtcatgctactcatccagtttgggaccatgatagtggac
cgggctctgtacctgcgcaagactctgctcgggaagtgcgtcttccaggtggtgctggtc
ttcgggatccacttctggatgttcttcatcttgccgggggtcacagagaggaggttcaac
cagaaccaagtggcccagctctggtactttgtcaagtgtgtgtattttggcctctctgcc
taccagatcaaatgtggctacccaaaccgggtccttggcaacttcctgaccaagagttac
aactacctgaacctgttcctctttcagggattccgcatggtccccttcctcacggagctg
cgagctgtcatggactgggtgtggacggacacaacgctcagtctgtccagctggatctgt
gtggaggacatctacgccaacatcttcattctcaggtgctggagagagtctgagaagaaa
tacccgcagccctccgggcagaagaagaagatgattgtgaagtacgggatgggtggcctg
atcatcttctccctcatctccatcatctggttcccccttctcttcatgtcgctggtcaag
tctgtggccggagtcacgaaccagcccttggacgtctccattcacctcagcattgggggt
tatgagcctttatttacaatgagcgcccagcagcaaaacctggccccttattctcaatct
gcattcaaccaaatgaccaacctgtttgcaaccaatccatctgccatgcagtttatagtg
aactacatgccggaggatattgtcactgccaaaatcaaaaccgacgccagcttgctgtgg
agcattagcccagccagccgagaggcaatgattgaagagctgagcaattcaactcacatc
tacatcaccctgcaatggactatactcaggaacgtctctctcgtcatgaacgccgagacg
gttgggaagcacacggtgaagtacgaagacaaagagatgagggatcagatcgttcagatg
ctgagagggaccaggaaggagccagtgattatcaagagtctcttgcccaaatacataaga
gctccctctggccctgaagcaaagattataaatcgtctctatgttggtaagcaaccttcc
aagtccaaagtggtgaaaacgaaccagttctcagtgacgaggcacgagaaaagagccaat
ggtctggtgggagaccagggcctgcctggggtcttcgtgctgtatgaactgtctcccatg
atggtgagattcacagagaggcagaggtcgttcacacattttctcacaggtgtgtgtgcc
atcgttggaggagtgtttacagtggcgggactcgtagactctctgatctaccactctgcg
agagccattcagaagaagatcgaactggggaaagcatcgtag
DBGET
integrated database retrieval system
