Polyodon spathula (Mississippi paddlefish): 121307826
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Entry
121307826 CDS
T07273
Name
(RefSeq) filamin-A-like
KO
K04437
filamin-A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04510
Focal adhesion
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121307826
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121307826
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121307826
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121307826
04147 Exosome [BR:
pspa04147
]
121307826
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
121307826
Intermediate filaments
Intermediate filament-binding proteins
121307826
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121307826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Big_3_5
CFSR
GBD_IRG7_N
Invasin_D3
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
121307826
NCBI-ProteinID:
XP_041096044
LinkDB
All DBs
Position
59:complement(1144341..1184138)
Genome browser
AA seq
1462 aa
AA seq
DB search
MIVIVLNTFVFQKPLAILTLDSKAIVDGNLKLILGLIWTLILHYSISMPMWDEEEDEEVK
QKTPKQRLLGWIQNKLPELPITNFSRDWQSGRALGALVDSCAPGLCPDWDSWDQTKPTDN
AREAMQQADDWLGIPQVIAPEEIVDPNVDEHSVMTYLSQFPKAKLKPGAPLRPKLNPKKA
RAYGPGIEPTGNVVMKRAQFTVETISAGMGEVLVYVEDPAGHREEAKVTANSDKNRTYSV
YYIPKVTGSHKVTVLFAGLHISKSPFEVDVGMSQGDSSKVTAQGPGLEPSGNIANKTTYF
DIYTAGAGVGEVEVVIVDPNGKKDTVECRVEDKGNSSYRCTYKPTLEGTHTIYITFSGAQ
IPKSPFTVTVGQACNPSLCRAKGRGLQPKGVRAKETADFRVYTKGAGTGELKVTIKGPKG
IEEPVKQKDLGDGVYGYEYYPSTPGNYIVTITWGGQQIPRSPFEVKVGTEAGSQKVRAWG
PGLEGGVVGKSADFVVEAVGDDVGTLGFSVEGPSQAKIECDDKGDGSCDVRYWPTEAGEY
AVHVLCNNEDIQHSPFMAEITAAPAKDFYPDKVKAYGPGLEKTGLAINKPTEFTVDAKQG
GKAPLKVQLQDGEGKPVDVQVRDNGNGTYTCSYTPRKPLKHTVMVSWGGVNIPDSPFRMT
IGAGTHPNKVKVSGPGVAKTGLKAYEPTYFTVDCAEAGQGDVSIGIKCAPGVVGPAEADI
DFDIIRNDNDTFTVKYTPPGAGSYTIMVLFGDQAVPMSPLRIKVDPSHDASKVKAEGPGL
NRSGVELCKPTHFTVNTKAAGKAKLDVQFAGPTKGEVVKDFEIINNHDNTHTVKYTPVQQ
GNTGVSVTYGGDHIPKSPFSVAVAPSLDLSKIKVAGLGDKMAVGKDQEFTVKSKGAGGQG
KVASKITGPSGKAVPCKVEPGLSPDNSQVRFIPREPGPYQVELTYDGVPVPGSPFPVEAV
APTDPSKVRCSGPGLEHAKVGETGKFSVDCTNAGLAELTIEIISDNGTEAEVHIQDNGDG
TYTITYIPLYPGVYTITIRYGGQDVPNFPARLTVEPAIDASGVKVFGPGIEGKGVFRDAT
TDFTVDARALTKSGGNHIKTRIKNPSGNRTDALIRDKGDGTYQVEYTPYEEGVHSVEVAY
DDAPVPSSPFRVPVTEGCDPARVRVHGPGLERGTTNKANKFTVETSGAGSGGLGLAVEGP
SEAKMSCTDNKDGSCSVEYIPYEPGTYNLNITYGGQPIRGSPFAVPVYDVVDSTKVKCLG
QGLGNNVRASIPQSFTVDTSKAGVAPLQVRVQGPKGVVEPVEVVDNGDRTHTVSYVPTRE
GPYSVNVLYGDEEIPRSPFKVKVLPTHDASKVKASGPGLNTTGVPASLPVEFTIDAKDAG
EGLLAVQITDPEGKPKKANIRDNQDGTYLVSYVPDMTGRYTILIKYGGDEIPYSPYRIRA
VPSGDASKCTVTGAGVGRTRDH
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcattgtattaaatacctttgttttccaaaaacctcttgcaatcctgactcta
gactccaaggccatcgtggatgggaacctgaagctgattctgggtcttatctggaccctg
attcttcactactccatctccatgcccatgtgggatgaggaggaggatgaggaggtgaag
cagaagacccccaagcagaggctactgggctggatccagaacaaactgccagagcttccc
atcaccaacttcagtcgggactggcagtccggccgggcgctcggagcccttgtggatagc
tgtgctccaggtctgtgccctgactgggactcatgggatcaaaccaaacctacggataac
gcccgcgaggccatgcagcaagctgatgactggctgggcatcccacaggtgatcgctcct
gaagaaatagtggaccccaatgtggatgaacactcagtcatgacctacctatcccagttc
cccaaagccaagctgaaaccaggtgcccccctgcgccccaagctcaaccccaagaaggcc
agggcctacggaccaggtattgagcccactggtaacgtggtaatgaagcgtgcccagttc
actgtggagacaatcagcgcaggaatgggagaggtgctggtgtatgtggaggaccctgct
ggccacagagaggaggctaaagtgactgccaacagcgacaagaatagaacctattctgtc
tactacattccgaaagtgactggatcccacaaggtgacggtactatttgctgggctgcac
atctctaagagcccctttgaggtggatgtggggatgtctcagggagattccagcaaggtg
acagcacaggggcctggcctggagcccagcggcaacattgccaacaaaactacctacttt
gatatctacaccgcaggtgctggagtgggcgaggtggaggtggtcattgttgatcccaat
gggaagaaggacactgtagagtgtcgagtggaggacaagggcaatagcagctaccgctgt
acttacaagccgacactagagggcactcacaccatctatatcaccttctctggagcccag
attcccaagagcccctttactgtgactgttggacaagcatgcaacccttccctgtgcaga
gctaagggccgcgggctgcaacccaaaggagtccgtgctaaagagactgctgacttcagg
gtgtacaccaagggagcaggcactggagagctgaaagtcaccattaagggaccaaaaggg
attgaggaaccagtgaagcagaaggacctgggggatggtgtctatggttacgagtattac
ccatcaacacccgggaactacattgtcaccatcacctggggaggtcagcagatcccgcgc
agcccctttgaggtgaaggtgggtacagaggcaggatctcagaaggtgcgagcctggggc
cctggtttggagggaggcgtagtcgggaagtcggctgactttgtggtggaggccgttgga
gacgacgtcggaactttgggtttctcagtggagggcccatcccaggctaagattgagtgc
gatgacaagggtgacggctcgtgcgacgtgcgttactggcctacagaggccggcgagtac
gctgtgcacgtgctctgcaacaatgaggacatccagcacagccccttcatggcagagatc
acagctgcgcctgccaaagacttctacccagacaaggtgaaggcgtatggacctggtttg
gaaaagactggcctggccattaacaagcccacagagttcactgtagatgccaagcaggga
ggcaaagctcccttgaaggtccagctccaggatggcgagggtaaaccagtggatgtccag
gtgagggacaatggaaacggcacctatacctgctcctacactccccgcaagcctctcaaa
cacacagtcatggtgtcctggggtggggtcaacatcccggacagtcccttcaggatgact
attggtgccggcactcaccccaacaaggtgaaggtgtcaggacctggagtggccaagact
ggcctgaaggcctatgagccgacctacttcactgtggactgcgccgaggctggccaaggc
gatgtcagcatcggcatcaaatgtgctccaggggtcgtcgggcctgcagaggccgacatc
gactttgacatcatccgaaatgacaacgacaccttcactgtgaaatacaccccacccggg
gcaggcagctacaccatcatggtgctgtttggtgaccaggctgtccctatgagtccactc
cgaatcaaggtggatccttcccatgatgccagcaaggtcaaggcagagggtccaggactg
aacaggagcggtgtggagctctgcaagcccacccacttcacagtcaacaccaaagcggcc
gggaaagctaaactggacgtgcagttcgctggtcccaccaagggagaggtggtcaaggac
tttgagatcatcaataaccacgacaacacccacacagtgaagtacactccagtgcagcag
ggcaacactggtgtgagcgtgacctatggaggggaccacattcccaaaagccccttttcc
gtggcagtcgccccgtcactggacttaagcaagatcaaagtggccggcctaggagacaag
atggcagttgggaaggaccaggagttcacagtgaagtccaagggggctggtggtcagggg
aaagtggcgtccaagatcactggcccctctgggaaggctgtgccctgcaaggtagagccg
ggcctgagtccagataacagccaggtccgcttcatccccagagagccggggccctaccag
gtggagctgacctacgatggagtgcccgtgccggggagccccttccccgtcgaggctgtg
gcccccactgacccctccaaggtgcgttgttcaggccctggtctggaacacgccaaggtg
ggagagacggggaagttcagcgtggactgtaccaacgccggccttgccgagctgaccatt
gagattatctctgacaacggcacagaggcggaggttcacatccaggacaacggtgacggc
acctacaccattacctacatccccctgtaccccggtgtctacaccatcaccatccgctac
ggggggcaggacgtgcccaacttcccagccagactcactgtggagcctgccatcgacgcc
agtggcgtcaaggtcttcggccccggcatcgaaggcaaaggcgtcttccgtgatgccacc
acagatttcaccgtggatgcccgcgcgctcacaaagagcggcggcaaccatataaagacc
cgaatcaaaaacccgtctggcaaccgcacagatgccctgatcagagacaagggagacgga
acctaccaagtggagtacaccccttacgaggagggtgtgcactctgtggaagttgcctat
gatgatgcccctgtgcccagcagcccgttccgcgtgcccgtgacggagggatgtgaccca
gccagagtgagggtccatgggcctgggctggagagaggcaccaccaacaaggctaacaaa
ttcacagtggagacgagtggtgctggcagtggcgggctggggctggccgtggagggcccc
tcggaagcgaagatgtcctgtacggataacaaggatggcagctgctctgttgagtacatt
ccttatgagcctggaacttacaacctgaacatcacctacgggggccagccaatcagaggc
agcccctttgctgtcccagtctatgatgttgtggactctaccaaggtgaagtgtctgggg
cagggcctgggcaacaacgtgcgtgccagcatcccacaatccttcactgtggacaccagc
aaggccggtgttgcgcccctgcaggtccgagtgcagggacccaaaggagtggttgaacca
gtggaagtggtggataatggagacagaacacacacagtcagctatgtccccacgagagag
ggaccttactctgtcaacgtcctctatggagatgaggagatcccacgcagtcctttcaaa
gtgaaggttctgcctactcacgatgccagcaaggtcaaggccagcgggccgggtctcaac
accacgggggtgccagccagcctgccagtggagttcaccattgatgccaaggatgcgggc
gaggggctgctggcagtacagatcacagaccctgaaggaaagcccaagaaggccaacatt
agagacaatcaggacgggacttacctggtgtcgtatgtcccagacatgactggacgctac
accatactgatcaaatacgggggagacgagatcccctactcgccatatagaatccgggct
gtgccctctggcgatgccagcaagtgcacagtcacaggagctggtgttggtcgtacacgt
gatcactag
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integrated database retrieval system
