Polyodon spathula (Mississippi paddlefish): 121308036
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Entry
121308036 CDS
T07273
Name
(RefSeq) rho GTPase-activating protein 35-like
KO
K05732
glucocorticoid receptor DNA-binding factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04510
Focal adhesion
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121308036
09142 Cell motility
04810 Regulation of actin cytoskeleton
121308036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121308036
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121308036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
RhoGAP-FF1
FF_RHG35_4th
Ras
Cdh1_DBD_1
NOG1
FF
Motif
Other DBs
NCBI-GeneID:
121308036
NCBI-ProteinID:
XP_041096276
LinkDB
All DBs
Position
Unknown
AA seq
1408 aa
AA seq
DB search
MMAKKQDARTPTHNLIVVGLSGTEKEKGQCGVGKSCLCNRFVRPSADDFYLDHTSVLSTS
DFGGRVVNNDHFLFWGEVMRPVEEGWECRMHVVEQTEFIDDQTFQPHRSTALQPYIKRAA
STKLASAEKLMYFCTDQLGLEQDFEQKQMPEGKLLVDGFLLCVDVSRGMNRNFDDQLKFV
NNLHNQLAKTKKPVVLVLTKCDEGVERYIKDSHTFALTKKNLQVVETSARSNVNVDLAFL
TLVQLIDKSRGKPKIILYFEALKQQSQQIATSKDRYEWLVSRIVKNHNENWPNISRRMQS
SPEYQEYVFLEGTQKAKKLFLQHVHRLKQEHIEKRRKMYLGTLPQALNFLIPELEEIDRL
SWSRVQHLLETKRDFPNWFVVLDETPWEATLHIDNMEDERIPLDLLGTVVAEQVYDAHLQ
RLRNERKRAEMRRLFKESLETSPFITAGKPWEEARSFIMNEEFYQWLEEPEYLDIYNRHQ
KEIIERAKEDFQELLLEYSELFYELEVDAKPSKEKMGAIQEVLGEEQRFKALQKLQAERD
ALVLKHIHFVYHPTKETCPSSLHCGDSKIEQLLASRFLGRPHHQDSGNHKSYTPSGDSKA
DRINLVILGKDGLARELANEIRAFCTNDDRYVLDGKMYELSLRPIEGNVRLPVNSFQTAS
FQPHGCLCLYNSKESLSYVLESIEKSRESTLGRRDNHMAQLPMTLILVTKRGVGSVGDIG
GETTRSLIFQGQQVASKLQCVFLDPASTGMGYGRSVNEKQINQVLKSLLDSKRNLNHPIP
SIKDLQQQLQNPEADLHIVMCVMCGDSYDVDQLLSPLLLPQHCRPSQSSASSGSSVHLEL
SVSGQRQSIDLSILSYHSSFSVRKSRLVHGYIVVYSAKRKASLATLCAFLCEIPDIIPVQ
LLAVGESQSELTDCEAVRDQLSQGEELAQEIEGRFASVVCDGSGGLLLQQQHRVDLFHPF
FKDVVEKKTIVEATHMYDNVAEACSTTESLHSPRGGSPSPVTTLLDSEDDIEPSSPYASL
REDGTFSSHGGVKLPSTCELEATDTLSFISEIRTFESKLNNKVPPPVRPKPAGHFDFRKV
NLSSFMDPSSHRRSLPSAVTWAPGDGGYDPSDYAEPMDAVAKPRPSEEDTIYSIPDGITQ
GKIITVRNTNKTHSNGGGNGSDSEVDSSSLERRRKLSSVGAKPRLYRDRSKLLGKFSSFR
TSFSIGSDDELGGPPRKKAEDESGPNKGDNSVIENEGEDPKRRNILKSLRRTTKKTRLKP
RHSLTKAPMESNYFGVPLVNVVSAERPIPLFIEKCIRYIEATGISTEGIYRVSGNKAEME
SMQRQFDLDHSLDLAEKDFTVNTVAGAMKSFFSELPDPLVPYSMQAELVEAHKINDREQK
LHTLKDVLRKFPKENLELFKYVISHLNK
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgaaaaagcaagatgcccggacgcccacccacaacctgatcgtggtgggtctg
tccgggacggagaaggagaagggccagtgcggggttggcaagtcctgcctctgcaaccgc
tttgtccgccccagtgccgatgacttctacctggaccacacttcggtgctgagcaccagt
gactttgggggccgagtggtcaacaatgaccacttcctcttttggggggaagtgatgagg
ccagtagaggagggatgggagtgtcggatgcacgtggtggagcaaacagagtttattgat
gaccaaactttccagccccaccgcagcacagccttgcaaccctacatcaagcgggctgcc
tccaccaaactggcttcagcagaaaagctgatgtacttttgcacagaccagctggggctg
gagcaggactttgagcagaagcagatgcctgaaggcaaacttctggtggatggcttcctc
ttgtgtgtggatgtaagccgtggaatgaaccgcaacttcgacgaccagctgaagttcgtc
aacaacctccacaaccagctggccaagaccaagaagcctgtggtcctggtgctgactaaa
tgtgatgagggcgtggaacggtacatcaaggactctcacaccttcgccctcaccaaaaag
aatctgcaggtggtggagacgtcggcacgctcaaatgtgaatgtggacctggccttcctc
acgctggtgcagttgatagacaagagcaggggcaaacccaagatcatcctctactttgag
gcactcaaacagcagagccagcagatcgccacctcaaaggaccgctacgagtggcttgtg
agccgcatcgtaaagaaccacaatgaaaactggcccaacatcagccggaggatgcagtcc
tccccagagtaccaggaatacgtcttcttggaaggcacgcagaaggccaagaagctcttc
ttgcagcacgtgcacaggctcaagcaagagcacatagagaaacggcgcaagatgtacctc
ggcaccttgccccaagctttgaacttcctgatacccgagctggaggagatcgaccgcctc
agctggagccgggtccagcacctactggagacgaagagagactttccgaactggtttgtg
gtcttagacgagaccccatgggaggccacgttgcacatagacaacatggaggacgagcgc
atccccctggaccttctgggcactgtggtggctgagcaggtctatgacgcccacctgcag
aggttgcgcaatgaacggaagcgggcagagatgcggcggctcttcaaggagagcttggag
acatctcccttcatcacggctgggaaaccctgggaagaagcacgcagcttcatcatgaat
gaggagttctatcagtggctggaggaaccagagtatctggatatctacaaccggcaccag
aaggaaatcatcgagcgggcaaaggaggacttccaggagttgctcctggaatattctgag
cttttctatgagctggaggtggatgccaagccaagcaaagagaaaatgggggccatccag
gaggtcctgggtgaggagcagaggttcaaagccctgcagaagctgcaggcagagcgtgat
gccttggtcctcaagcacatccactttgtctaccaccccaccaaggagacatgccccagc
agcttacactgtggggacagcaagatagagcagcttctggcctcccgcttcctgggacgg
ccccaccatcaggacagtgggaaccacaagtcatacacaccgtcgggagacagcaaggcc
gaccggatcaacctggtcatcctgggcaaggacgggctggcccgagaactagccaatgaa
atccgggctttctgcaccaatgacgaccggtacgtgctggacggaaagatgtatgaactc
tcgctgcggcccattgaaggcaacgttcgcctacctgttaactctttccagacagcctct
ttccagcctcatggctgcctctgcctctacaactccaaggagtccttgtcctacgtcctg
gagagcatagaaaagagtcgggaatccactctgggcaggagggacaaccacatggcacag
ctccccatgactctcatcctggtcacaaagcgtggggtcggttctgtaggagacataggt
ggagagactactcgcagcctgattttccagggccagcaggtagccagcaagctgcagtgc
gtttttttagatccagcttcaacaggcatgggttacggacgtagcgtgaatgagaagcag
atcaaccaggttttgaagagtttgctcgactctaaacggaacctcaaccatccaattccc
agcattaaagacttgcagcaacagctgcagaaccctgaagcagacctgcacatcgttatg
tgtgtaatgtgcggggattcgtacgacgtggaccaactcctgtcccctctcctgcttccc
cagcactgcaggccttcccagtcatctgccagcagtgggagctcagtccaccttgagcta
tcagtaagcggccagcgacagagcattgacctctccatcctctcctaccactcctccttc
agcgtgcgcaagagccggctggtgcatggttacatcgtagtgtactctgccaagcggaag
gcctcgctcgccacactgtgcgcttttctctgcgagatcccggatatcatacctgtgcaa
ctcctagccgtcggtgagagccagtctgagctgaccgactgcgaggcagtcagggaccag
ctgagccaaggcgaagaactagcccaggagatcgaagggaggtttgccagtgtggtttgt
gacggcagtggaggcctgctcctgcagcagcagcacagagtagacctcttccaccctttc
ttcaaagatgtggtggagaagaagacgatagtggaagccactcacatgtacgacaatgtg
gcggaggcctgcagcaccaccgagagcctccactcccctagaggagggtcgcccagcccg
gtcaccaccctgctggactcggaggatgacatagagccctcttctccttatgcttctctc
cgtgaggacggtaccttctcctctcatggtggggtcaagctcccatccacctgtgaactg
gaagccactgacaccttatccttcatctcggagatcaggacctttgagagcaagctcaac
aataaggtgccaccgccagtccggcccaagccggcgggccacttcgacttccgcaaagtc
aacctcagcagcttcatggacccaagcagccacaggcgctcgctcccatcggcggtcaca
tgggcccctggggacggaggctacgacccttcagattatgcagagcccatggatgcagtg
gccaagcctcggcccagcgaagaggacaccatctactccattcctgacggcatcacgcaa
ggcaagatcatcacggtccgcaacaccaacaagacgcactcgaacggtgggggcaacggg
tcggacagcgaggtggacagcagctcgctggagcgtcggcgcaagctctcctccgttggc
gccaagcctcggctgtaccgagaccggtccaagctgctgggcaagttcagcagtttccgc
accagcttctccatcggcagcgacgacgagctgggaggaccgcccaggaagaaggcagag
gacgagagcgggccaaacaagggcgacaactcggtgatcgagaacgagggagaggacccc
aagaggaggaacatcctcaagagccttcgcaggaccaccaagaaaactaggctcaagcct
cgacactcgcttaccaaagccccgatggagagcaactattttggggtgccgctggtcaac
gtggtatcggcagagcggcccattcctctcttcatcgagaagtgcatcagatacatcgaa
gcgacagggattagcactgaaggaatttaccgagtgagtggaaacaaggcagagatggag
agcatgcagaggcagtttgatctggatcacagtctggacttggcggagaaggacttcact
gtgaacacggtggctggagcaatgaagagcttcttctcagagctgcctgatcccctggtg
ccctacagcatgcaggcggagcttgtggaggctcacaaaatcaatgaccgggagcagaag
ctgcacacactcaaggacgttctgaggaagttccccaaggagaacctggagctcttcaaa
tatgtcatcagccacttgaacaagtga
DBGET
integrated database retrieval system
