Polyodon spathula (Mississippi paddlefish): 121308263
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Entry
121308263 CDS
T07273
Name
(RefSeq) serine/arginine-rich splicing factor 4-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121308263
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121308263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121308263
Spliceosome [BR:
pspa03041
]
Common components
Common spliceosomal components
SR proteins
121308263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121308263
NCBI-ProteinID:
XP_041096483
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MSRVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYELNGKVL
CGERVIVEHARGPRRDGSYSSGRSGYGYRRSGRDKYGPPTRTEYRLVVENLSSRCSWQDL
KDYMRQAGEVTYADAHKGRKNEGVIEFKSYSDMKRALEKLDGTEVNGRKIRLVEDRPGSR
RRRSYSRSRSRSRSYSRSRRSRKSHSTSSQSSRSKSRSKNQSHSRSASHSASRSKSRSPS
KKKEKSRSHSRSRGGSNNNRESTYEKGRSRSKDRNGGQRASRSQSKEERSSRKRSRDESC
SRSKKQSRGDSKSSSSKQDKKGGDKDYSRSRSRSESEDKECSRKSQSESKNGEVGAGDNH
RSRSSSKSRSKPKGKSTSRSRSRSASKARSKSRSRSRSAARSASRSRSRSLSPS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggtttatattgggaggctcagctaccaggcacgggagagggacgtcgagagg
ttcttcaagggctacgggaagatactcgaggtcgacctcaagaacgggtatgggtttgtt
gagtttgatgacccgcgggatgcggacgatgctgtctatgaactgaatggcaaagtcctc
tgtggggagagggtcattgtggaacatgcaagaggtccccgtcgcgatggaagctacagc
tccggacgcagtggatatggttatagacgaagtgggagagacaagtatgggcctccgact
cgtacagaatacaggctggttgtagagaatctgtccagccgttgcagttggcaggatcta
aaggattatatgcgtcaagcaggggaggtcacgtatgccgatgcgcacaaaggaagaaag
aacgaaggcgtcattgagttcaagtcttactctgacatgaagcgcgctctggagaagctg
gacggcacagaggtgaacggcaggaagatccgcctggttgaagacaggcctggctcacgc
cgccgtcgctcctactccaggagtcgcagccgctccaggtcttactccagaagcaggcgt
tcacgtaagagccacagcaccagcagccagagtagtcgctcgaagagcaggtccaagaac
caatctcattccaggtccgcttctcattcggcgagcaggagcaagagccgcagcccgagc
aaaaagaaagagaaaagccggagccacagcaggagcagaggaggcagcaacaacaacaga
gagagtacatacgagaaggggagaagcaggagcaaagaccggaacggaggccagagggcc
agcaggagtcagagcaaagaggagaggagcagcaggaagaggagccgggatgagagctgc
agcaggagcaaaaaacagagcaggggggacagcaagagcagcagcagcaagcaggacaag
aagggaggagacaaagactattccagatccaggtccaggtcggagtctgaagacaaggag
tgctccaggaagtcacagagcgagtccaagaatggtgaggtgggagctggtgacaaccac
aggtctcgctccagctcaaagtcaaggtccaagcccaagggcaaatccacatcccgatct
agatccaggtctgcttctaaagccagatctaaatccaggtctcgttctaggtcagctgct
agatctgcatcacgttccaggtcaaggtctctctccccatcttaa
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