Polyodon spathula (Mississippi paddlefish): 121308316
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Entry
121308316 CDS
T07273
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5-like
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121308316
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121308316
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
121308316
NCBI-ProteinID:
XP_041096577
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
PCDLEEVMMDALVSNKPDFVKLFIDNGMNMCDFLTYNKLQDLYCAIPPKCLLHQLLQRKH
EEPKLSITARNGSMADSLEQKPKFTLYEVSKVLKDFLHDSCRGFYQETSKKGTMEKAGIG
RVSHVQKPSLNMSQKCENPWRDLFLWAVLLNRQEMANYFWATGPEAVAAALAGCKILKEM
AHLESEAESARSMKEAKYEQFALDLFSECYTNSEDRAFALLVRKTKSWNKTTCLDLATEA
DAKSFFAHDGVQSHLTKMWWGAMKSDTRIWKLVLSFFCPPLIYTNLITFSEDEHHTVGGT
EQFKEFDSQDSEKAMLLKQRQNSDTIKPEKQVMTSNNVCMKFLFTRWKKFWGAPVTVFLG
NVIMYFAFLFLFTYVILVDFQPPPPYGPSIPEITLYFWVFTLVLEELRQSFFTDEDTSII
KKFKLYVEDNWNKCDMVAILLFVLGVFCRMAWSTYEAGRTVLALDFMVFALRLIHIFAIH
KQLGPKIIIVERMMKDVFFFLFFLSVWLIAYGVATQALLHPNDTRVDWIFRRVLYRPYLH
IFGQIPLEEIDGNKNKNTFMVHVV
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
ccttgtgacttggaagaagtcatgatggatgccttggtcagcaataaacctgattttgtg
aagcttttcattgacaatgggatgaacatgtgcgacttcctgacatacaacaaactccag
gacttgtactgtgcaatccctccgaagtgccttctccaccaactcctgcagaggaaacac
gaggagcccaaactctccataacggcgcgcaatggcagcatggcagattctctggagcag
aaaccaaagttcactctgtatgaggtctccaaagtgctcaaagacttcctgcacgattcc
tgcagaggattttaccaggagacctccaagaaaggaacaatggaaaaagccggtataggt
cgagtcagtcatgtgcaaaagccctcactcaacatgagccagaaatgtgagaatccgtgg
agggatctctttctgtgggcagtccttctgaacagacaggaaatggccaactacttctgg
gctacaggcccggaggcagtggcagcagctctagctggctgtaagatcctgaaagagatg
gctcacctggaatcagaggcagagtctgctcggagcatgaaggaggctaaatacgagcaa
ttcgcactggacttgttcagtgaatgctacaccaacagtgaggacagggcctttgctttg
ctggtcagaaagacaaagtcctggaacaaaaccacctgcctagacctggcaacagaagcc
gacgccaagtccttcttcgcccatgatggtgttcagtctcacttgacgaagatgtggtgg
ggagccatgaagtcagacacccggatttggaaactagtgctctcattcttctgtcctcct
ctaatttacaccaacttaataacattcagcgaggacgagcatcacacagtgggtggaacg
gaacagtttaaggaattcgacagccaggatagtgagaaggcaatgctgctcaagcagagg
cagaacagtgacacgatcaagcctgaaaaacaggtaatgaccagcaataacgtttgcatg
aagttcctgttcacgagatggaagaagttctggggtgccccggtcactgtgttcctgggc
aatgtcatcatgtactttgcattcctcttcctttttacttacgttatcttggtggacttc
caaccccctcctccctacggcccatccatcccagagatcaccctctacttctgggtcttc
accctggtgttggaggagctgcgacagagtttctttacagatgaagacaccagcatcata
aagaagttcaagctctatgtggaagacaactggaacaagtgtgatatggtggccatcctg
ctgttcgtgctcggggtgttttgcaggatggcatggtctacgtatgaagcaggtcgtaca
gtcctggccctagatttcatggtgtttgctctccggttgattcacatctttgccatccac
aagcagttgggcccaaagattatcattgtggaaagaatgatgaaggatgtcttcttcttc
ctctttttcctgagcgtctggctcattgcctatggagtggccactcaagctctgctgcac
cccaacgatacccgggtcgactggatctttcgccgcgtgctttatcggccctacctacat
atatttgggcagatcccactggaagagattgatggtaataaaaataaaaacactttcatg
gttcatgttgtttga
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