Polyodon spathula (Mississippi paddlefish): 121308339
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Entry
121308339 CDS
T07273
Symbol
syf2
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121308339 (syf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121308339 (syf2)
Spliceosome [BR:
pspa03041
]
Complex B
Other components
Prp19-related factors
121308339 (syf2)
Complex C
121308339 (syf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
121308339
NCBI-ProteinID:
XP_041096612
LinkDB
All DBs
Position
Unknown
AA seq
239 aa
AA seq
DB search
MASGVESAGPGSSREESECSTASLKREDRLRKFRELHFKRNEARKLNHQEVVEEDKRLKL
PSNWEAKKARLEWELQVDEKKKECAAKGEDYNRVKLLDISAEDAERWERKKKKRNPDPGF
SDYAAAQLRQYQRLTKQIKPDMENYEKQRDECGDEFYPTSNSLLHGSHVPSKEGVDRMVE
DVEKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggtgtggaaagtgcaggtccaggcagcagccgtgaagagtctgaatgcagc
acagcctctctgaaaagggaagaccggttgagaaaatttcgggaactgcattttaaaagg
aatgaagctcgcaaactgaaccaccaggaagtcgtggaagaagacaaaagacttaaactg
ccgtcaaactgggaagcaaagaaggctcggctagagtgggaactgcaagtagatgaaaag
aagaaggaatgcgcagcaaaaggagaagattacaacagggttaagctgctggatatcagt
gctgaggatgcggaaagatgggaaaggaagaaaaagaagaggaatccagacccaggcttt
tcagattatgctgctgcacagttacgtcagtatcagagactcactaagcagattaagcct
gacatggagaattatgaaaaacaacgtgacgagtgtggagatgaattctatcctacatcg
aacagcctgttgcatggaagtcatgtgccttcaaaagaaggagttgacaggatggtagaa
gatgtggagaaacagattgagaagagagccaagtacagcagacgcagagcatacaatgat
gatgctgatatcgactacattaatgagaggaatgccaagttcaacaagaaagcagaaaga
ttctatggaaaatacactgctgagatcaagcagaacctggagagaggcactgcggtttaa
DBGET
integrated database retrieval system
