Polyodon spathula (Mississippi paddlefish): 121308363
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Entry
121308363 CDS
T07273
Symbol
yars1
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121308363 (yars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspa01007
]
121308363 (yars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121308363 (yars1)
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121308363 (yars1)
Enzymes [BR:
pspa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
121308363 (yars1)
Amino acid related enzymes [BR:
pspa01007
]
Aminoacyl-tRNA synthetase
Class I (A)
121308363 (yars1)
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121308363 (yars1)
Prokaryotic type
121308363 (yars1)
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121308363 (yars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
121308363
NCBI-ProteinID:
XP_041096655
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MTDNLSPEEKYHLITRNLQEVLGEEKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIA
DFLKAGCEVTILFADLHAYLDNMKAPWDLLELRTKYYEQVIKAMLESIEVPLEKLKFVKG
TDFQLSREYTLDVYKLSSTVTQHDAKKAGAEVVKQVDHPLLSGLLYPGLQALDEEYLKVD
AQFGGVDQRKIFTFAEKYLPSLGYTKRIHMMNPMVPGLTGGKMSSSEEESKIDLLDRKED
VKKKLKKAFCEPGNIENNGVLSFVKHVIFPLHSEFVIKKDEKWGGDKTYTAFGDLEKDFA
EELVHPGDLKNSVEAALNKLMDPIRKKFESPELRKLTNTAYPAQSKPKGPAKGNPQNAEE
DEVVPSRLDIRVGKVISVEKHPEADSLYLEKIDVGEAEPRTVVSGLVAFVPASELQDRLV
VLLCNLKPQKMRGIESQAMLLCASTEGEGRRVEPLDPPTGSAPGERVFVEGYEAGKPDDE
LKPKKKVFEKLQADFKISGECVAQWSEKNFMTKLGLITCKSLRGGNIS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaacctgagcccagaggagaagtatcacctcatcaccaggaatctgcaggag
gtgctgggggaggagaagctcaaagagatcctgaaagagagggagctgaagatctactgg
ggaacagccaccaccggcaagccgcacgttgcctactttgtgcccatgtccaagatcgct
gacttcttaaaggccgggtgtgaagtgacgatcctgtttgctgacctgcatgcctacctg
gacaacatgaaggctccctgggacctgctggagctgcggacaaagtactatgagcaggtg
atcaaagccatgctggagagcatagaggtgccgctggagaagctcaagtttgtgaaggga
accgacttccagctcagccgggagtacactttggatgtctacaagctgtcctccacggtg
acacagcatgatgccaagaaagccggggcggaggtggtgaagcaagtggaccatcccctc
ctgagcggtctgctgtacccaggactgcaggctcttgatgaggagtatttgaaagtcgat
gcccagtttgggggagtggatcagaggaaaatcttcaccttcgctgaaaagtacctgccg
tctctgggctacaccaagcgcatccacatgatgaaccccatggtcccgggactcacaggg
gggaagatgagctcctctgaggaggagtctaagattgacctgctggacaggaaggaagat
gtgaagaagaagctgaagaaggctttctgtgagccggggaacatcgagaataacggggtc
ctgtccttcgtcaagcacgtcatctttcctctccactctgagtttgtcatcaagaaagat
gaaaagtggggtggagacaaaacctacaccgcttttggagatctggagaaggattttgca
gaggagctcgtgcacccaggggacctgaagaactcggttgaagccgccctgaacaaactg
atggatccgatcaggaagaagtttgaaagcccagagctgaggaaactgacaaacacagcc
tacccagcccagtccaaaccgaaggggccggctaaaggaaatccccaaaatgcagaagag
gatgaggtggtaccgtcgcggctggacatcagagttgggaaagttatcagcgttgagaag
cacccggaagcagacagtctatacttggagaagattgacgtgggcgaggcagagcccagg
acggtggtcagcgggctggttgcgtttgtccctgcgtccgagctgcaggacaggctggtg
gtcctgctctgtaacctcaaaccccagaagatgagaggcatcgagtcccaggccatgctg
ctgtgtgcctccactgaaggagagggtcgcagagtggagcccctggacccccccacaggg
tcagctccgggggagcgtgtcttcgtggaagggtacgaggctggcaagccagacgacgag
ctgaagccaaagaagaaagtgttcgagaagctccaggccgactttaaaatctcaggggaa
tgcgttgcgcagtggagtgagaagaacttcatgaccaaactgggactgatcacatgtaaa
tcgctgagaggagggaacatcagctaa
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