Polyodon spathula (Mississippi paddlefish): 121308406
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Entry
121308406 CDS
T07273
Name
(RefSeq) elongation factor 1-alpha 1-like
KO
K03231
elongation factor 1-alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121308406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121308406
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121308406
03012 Translation factors [BR:
pspa03012
]
121308406
04131 Membrane trafficking [BR:
pspa04131
]
121308406
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121308406
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121308406
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121308406
Translation factors [BR:
pspa03012
]
Eukaryotic type
Elongation factors
121308406
Membrane trafficking [BR:
pspa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
121308406
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121308406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
121308406
NCBI-ProteinID:
XP_041096718
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETTKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIIGVNKMDSTEPPYSQKRYEEISKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEPSSNMPWFKGWKVERKEGNANGTTLLEALDSIIPPQR
PTNKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLV
EALPGDNVGFNIKNVSVKDIRRGNVAGDSKNDPPMEAGSFTAQVIVLNHPGQINAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFVKSGDAAIVNMVPGKPMCVESFSDYPP
LGRFAVRDMRQTVAVGVIKAVDKKAPGAGKVTKSAVKAAKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagacccacatcaacatcgttgttattggacacgtcgattccggtaaa
tccaccaccaccggccacctcatctacaaatgcgggggtatcgacaagcgagccatcgag
aagttcgagaaggaggccgcggagatgggaaagggctccttcaagtatgcctgggtgttg
gacaagctgaaggctgagcgtgagcgtggtatcaccattgacatctccctctggaagttt
gaaaccacaaaatactatgtcaccatcattgatgctcccggccacagagatttcatcaag
aacatgatcaccgggacctcgcaggctgactgtgctgtgctgattgttgccggaggtgtt
ggcgagtttgaagccggtatctctaagaacggacagacccgtgaacacgccctcctggcc
tacactcttggtgtgaagcagctcatcattggcgtcaacaagatggactccactgagcca
ccctacagtcagaaacgttacgaggaaatcagcaaggaagtcagcacctacatcaagaag
atcggctacaaccccgccactgtggcctttgtgcccatctctggctggcacggagacaac
atgctggagcccagctcaaatatgccctggttcaagggatggaaggttgagcgtaaggag
ggcaatgccaacggcaccaccctgctagaggcgctggactccatcatccctccccagcgc
cccacaaacaagcccctgcgtctgcccctgcaggatgtctacaagatcggaggtattgga
actgtacccgtgggccgtgtggagactggcaccctgaaggctggcatgatcgtcaccttt
gcccctgccaatgtgaccactgaagtaaaatctgtggaaatgcaccacgagaccctggtc
gaggctcttcccggagacaacgttggcttcaacatcaagaacgtgtctgttaaggacatc
cgtcgtggcaacgtggctggagacagcaagaacgacccacccatggaggccggctccttc
actgcccaggttattgtcctgaaccatcctggccagatcaatgctggttacgctccagtg
ctggattgccacactgctcacattgcctgcaagtttgctgagctgaaggagaagattgac
cgtcgttccggtaagaagctggaagacaaccccaagtttgtgaagtctggagacgctgcc
attgtgaacatggtccctgggaaacccatgtgtgtggagagcttctcagactaccctccc
ctcggtcgttttgctgtgcgtgacatgaggcagactgttgctgttggtgtcatcaaggct
gttgacaagaaggctcctggagctggcaaggtcaccaagtctgcagtgaaggctgctaag
aaatga
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