Polyodon spathula (Mississippi paddlefish): 121308407
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Entry
121308407 CDS
T07273
Name
(RefSeq) elongation factor 1-alpha, somatic form-like
KO
K03231
elongation factor 1-alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121308407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121308407
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121308407
03012 Translation factors [BR:
pspa03012
]
121308407
04131 Membrane trafficking [BR:
pspa04131
]
121308407
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121308407
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121308407
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121308407
Translation factors [BR:
pspa03012
]
Eukaryotic type
Elongation factors
121308407
Membrane trafficking [BR:
pspa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
121308407
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121308407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
121308407
NCBI-ProteinID:
XP_041096719
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIIGVNKMDSTEPPYSQKRYEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEPSANMPWFKGWKVERKEGNANGTTLLEALDSIIPPQR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKPGMIVTFAPANVTTEVKSVEMHHETLA
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPGEAGSFLAQVIILNHPGQIAAGYAPV
LDCHTAHIACKFAELREKIDRRSGKKLEDNPKFVKSGDAAIVNMIPGKPMCVESFSSYPP
LGRFAVRDMRQTVAVGVIKSVEKKAPSTGKVTKSAEKAAKKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggaaaagacccacatcaacatcgtcgttatcggacacgtcgactcgggtaaa
tccaccaccaccggccacctcatctacaaatgcgggggtatcgacaagaggaccatcgaa
aaattcgagaaggaggcagctgagatgggaaagggctccttcaagtatgcctgggtgttg
gacaagctgaaggctgagcgtgagcgtggtatcaccattgacatctccctctggaagttt
gagaccagcaaatactatgtcaccatcattgatgctcccggccacagagatttcatcaag
aacatgatcaccgggacctcgcaggctgactgtgctgtgctgattgttgccggaggtgtt
ggtgagtttgaagccggtatctctaagaacggacagacccgtgaacacgccctcctggcc
tacactctgggtgtgaagcagctcatcattggcgtcaacaagatggactccactgagcca
ccctacagccagaaacgttacgaggaaatcaccaaggaagtcagcgcctacatcaaaaag
attggctacaaccctgccactgtggcctttgtgcccatctctggctggcatggagacaac
atgctggagcccagcgcaaacatgccctggttcaagggatggaaggttgagcgtaaggag
ggcaatgccaacggcaccaccctgctagaggcgctggactccatcatccctccccagcgc
cccacagacaagcccctgcgtctgcccctgcaggatgtctacaagatcggaggtattgga
actgtacccgtgggccgtgtggagactggtaccctgaagcctggcatgatcgtcaccttt
gcccctgccaatgtgaccactgaagtcaagtctgtggaaatgcaccacgagaccctggcc
gaggctcttcccggagacaacgttggctttaacgtcaagaacgtgtctgtcaaggacatc
cgtcgtggcaacgtggctggagacagcaagaacgacccacctggtgaggctggcagcttt
cttgcccaggttatcattttgaaccaccctggtcagatcgcagctggttacgctccagtg
ctggattgccacactgctcacattgcctgcaagttcgctgagctcagggagaagattgac
cgtcgttccggtaagaaactggaagacaaccccaagtttgtgaagtctggagatgctgcc
attgtgaacatgatccctgggaaacccatgtgtgtggagagcttctccagctaccctccc
ctcggtcgtttcgctgtgcgtgacatgaggcaaacggtcgctgtcggtgtcatcaagtcc
gtcgaaaagaaggcacccagcacaggcaaagtcaccaagtctgctgagaaagccgctaaa
aagaaatga
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