Polyodon spathula (Mississippi paddlefish): 121308408
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Entry
121308408 CDS
T07273
Name
(RefSeq) elongation factor 1-alpha 1-like
KO
K03231
elongation factor 1-alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121308408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121308408
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121308408
03012 Translation factors [BR:
pspa03012
]
121308408
04131 Membrane trafficking [BR:
pspa04131
]
121308408
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121308408
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121308408
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121308408
Translation factors [BR:
pspa03012
]
Eukaryotic type
Elongation factors
121308408
Membrane trafficking [BR:
pspa04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
121308408
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121308408
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
FcpA
Motif
Other DBs
NCBI-GeneID:
121308408
NCBI-ProteinID:
XP_041096720
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRAIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETTKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAGGV
GEFEAGISKNGQTREHALLAYTLGVKQLIIGVNKMDSTEPPYSQKRYEEISKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEPSSNMPWFKGWKVERKEGNANGTTLLEALDSIIPPQR
PTNKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMIVTFAPANVTTEVKSVEMHHETLV
EALPGDNVGFNIKNVSVKDIRRGNVAGDSKNDPPMEAGSFTAQVIVLNHPGQINAGYAPV
LDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFVKSGDAAIVNMVPGKPMCVESFSDYPP
LGRFAVRDMRQTVAVGVIKAVDKKAPGAGKVTKSAVKAAKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagacccacatcaacatcgtcgttatcggacacgtcgattccggtaaa
tccaccaccaccggccacctcatctacaaatgcgggggtatcgacaagcgagccatcgag
aagttcgagaaggaggccgcggagatgggaaagggctccttcaagtatgcctgggtgttg
gacaagctgaaggctgagcgtgagcgtggtatcaccattgacatctccctctggaagttt
gaaaccacaaaatactatgtcactatcattgatgctcccggccacagagatttcatcaag
aacatgatcaccgggacctcgcaggctgactgtgctgtgctgattgttgccggaggtgtt
ggcgagtttgaagccggtatctctaagaacggacagacccgtgaacacgccctcctggcc
tacactcttggtgtgaagcagctcatcattggcgtcaacaagatggactccactgagcca
ccctacagtcagaaacgttacgaggaaatcagcaaggaagtcagcacctacatcaagaag
atcggctacaaccccgccactgtggcctttgtgcccatctctggctggcacggagacaac
atgctggagcccagctcaaatatgccctggttcaagggatggaaggttgagcgtaaggag
ggcaatgccaacggcaccaccctgctagaggcgctggactccatcatccctccccagcgc
cccacaaacaagcccctgcgtctgcccctgcaggatgtctacaagatcggaggtattgga
actgtacccgtgggccgtgtggagactggcaccctgaaggctggcatgatcgtcaccttt
gcccctgccaatgtgaccactgaagtaaaatctgtggaaatgcaccacgagaccctggtc
gaggctcttcccggagacaacgttggcttcaacatcaagaacgtgtctgttaaggacatc
cgtcgtggcaacgtggctggagacagcaagaacgacccacccatggaggccggctccttc
actgcccaggttattgtcctgaaccaccctggccagatcaatgctggttacgctccagtg
ctggattgccacactgctcacattgcctgcaagtttgctgagctgaaggagaagattgac
cgtcgttccggtaagaagctggaagacaaccccaagtttgtgaagtctggagacgctgcc
attgtgaacatggtccctgggaaacccatgtgtgtggagagcttctcagactaccctccc
ctcggtcgttttgctgtgcgtgacatgaggcagactgttgctgttggtgtcatcaaggct
gttgacaagaaggctcctggagctggcaaggtcaccaagtctgcagtgaaggctgctaag
aaatga
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