Polyodon spathula (Mississippi paddlefish): 121308426
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Entry
121308426 CDS
T07273
Symbol
ubb
Name
(RefSeq) polyubiquitin-B
KO
K08770
ubiquitin C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03320
PPAR signaling pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04137
Mitophagy - animal
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121308426 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121308426 (ubb)
04137 Mitophagy - animal
121308426 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121308426 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121308426 (ubb)
Ubiquitin system [BR:
pspa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
121308426 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
121308426
NCBI-ProteinID:
XP_041096745
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccttgactggcaaaaccatcacccttgaggttgagcccagt
gacaccattgagaatgtcaaggccaagatccaggacaaagaaggaatccccccagaccag
cagaggttgatctttgccggcaagcagctggaggatggacgcacactgtccgactacaat
atccagaaagagtccactctgcatttggtcctgaggttgagaggaggcatgcagatcttc
gtgaagaccttgactggcaaaaccatcacccttgaggttgagcccagtgacaccattgag
aatgtcaaggccaagatccaggacaaagaaggaatccccccagaccagcagaggttgatc
tttgccggcaagcagctggaggatggacgcacactgtccgactacaatatccagaaagag
tccactctgcacttggtcctgaggttgagaggaggcatgcagatcttcgtgaagaccttg
actggcaaaaccatcacccttgaggttgagcccagtgacaccattgagaatgtcaaggcc
aagatccaggacaaagaaggaatccccccagaccagcagaggttgatctttgccggcaag
cagctggaggatggacgcacactgtccgactacaatatccagaaagagtccactctgcac
ttggtcctgaggttgagaggaggcatgcagatcttcgtgaagaccttgactggcaaaacc
atcacccttgaggttgagcccagtgacaccattgagaatgtcaaggccaagatccaggac
aaagaaggaatccccccagaccagcagaggttgatctttgccggcaagcagctggaggat
ggacgcacactgtccgactacaatatccagaaagagtccactctgcacttggtcctgagg
ttgagaggaggcatgcagatcttcgtgaagaccttgactggcaaaaccatcacccttgag
gttgagcccagtgacaccattgagaatgtcaaggccaagatccaggacaaagaaggaatc
cccccagaccagcagaggttgatctttgccggcaagcagctggaggatggacgcacactg
tccgactacaatatccagaaagagtccactctgcacttggtcctgaggttgagaggaggc
atgcagatcttcgtgaagaccttgactggcaaaaccatcacccttgaggttgagcccagt
gacaccattgagaatgtcaaggccaagatccaggacaaagaaggaatccccccagaccag
cagaggttgatctttgccggcaagcagctggaggatggacgcacactgtccgactacaat
atccagaaagagtccactctgcacttggtcctgaggttgagaggaggcatgcagatcttc
gtgaagaccttgactggcaaaaccatcacccttgaggttgagcccagtgacaccattgag
aatgtcaaggccaagatccaggacaaagaaggaatccccccagaccagcagaggttgatc
tttgccggcaagcagctggaggatggacgcacactgtccgactacaatatccagaaagag
tccactctgcacttggtcctgaggttgagaggaggcatgcagatcttcgtgaagaccttg
actggcaaaaccatcacccttgaggttgagcccagtgacaccattgagaatgtcaaggcc
aagatccaggacaaagaaggaatccccccagaccagcagaggttgatctttgccggcaag
cagctggaggatggacgcacactgtccgactacaatatccagaaagagtccactctgcac
ttggtcctgcgtctcagaggtggtcaatga
DBGET
integrated database retrieval system
