Polyodon spathula (Mississippi paddlefish): 121308455
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Entry
121308455 CDS
T07273
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121308455 (med13a)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
121308455 (med13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
121308455
NCBI-ProteinID:
XP_041096803
LinkDB
All DBs
Position
Unknown
AA seq
2160 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFDLADLTGIKWKRYVWQGPTSAPILFPVTEEDPILCSFSRC
LKAEVLSVWRRHHTPGRRELWLFWWGEDPNFAELVHHELSGEEDGVWESGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCAFTFFLHGDSHVVTCVEI
NQHQPVYHLSEEHLTLAQQSSSPFEVILSPFGLNGTLTGQSFKLSDPPTQKLIEEWKQFY
PITSSSKEGSEEKQVQMDWEEDSLAAVGVLVGGVRMVYPSCLVLVPQSDIPAVTPMGSSH
SSAVYSGVHQVPASTRDPAISSVTLTPPTSPEEVQTVDTQSAQKWVKFSSVSDGFSADST
SHHGGKIPRKLASQVVDKVWQECNINRAQNKRKFSAITNGTCEEEVVDKIGAWDFVEPTQ
RSICNCSRHKNLKQRGAGPPGQPQPAGQPPQPPLKHKANEKLEKGDKQQKRPLTPFHHRS
SVCDEVSLDPDSASQRLGIRSQDSRGRFSNLRPADVVSVAKTPQLHGGTEMVSSPPPPPL
SPHPCERGEDGGEPMKNPSTPHSQHFYQPTPEPCLVSQKVAEEHRLDHHPYPPAFPEILE
PTVYVGAAVNPDDGRTDAPWKFFVLPRKKDSQFPTPQLPTDKLRDDPVGSQENVSVTELM
ANSKKALKVSDELVQMYLQRKNQHLSAAISDTDHEPETDPYAFVDGDVEFSFSDKRDKQC
GEREVGKKHKPDDGSSISADGEDAMSLFSPSGKTEAQRADAQNRMASTSLIHETDLAVSI
NDLDNLFNSDEDELTPGSRRAVNGMDGKFSSKDSKPAALDPLSCINSADLHQMFPTPPSL
EQHIMGYSPMNMNSKEYGSMDNASGMTVLDGNSTLGGHFKIEVEEGFCSPKQSEIKDFSF
VYKAEMSQTFVGCSMFAPLKTLPSQCLQPIKLPEECIYRPSWTVGKLELLNPVPAMTFLN
KDGNIPSVGSAVDQDYIQTYTPQTHTPFMSNSAPPSNSGAGILPSPATPRFSAPTPRTPR
TPRTPRGAGGPSSVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVNLI
LSESVMNLFKDCNFDSCCICVCNMNIKGADVGVYIPDPNCELQYSCTCGFSAVMNRKFGN
NSGLFLEDELDIIGRSSDFSREAEKRFEALRTASVERSGLKDKLPDELILLLQDQCTNPF
SPIAAFEQEATPAAVPRPGLALSPSPRVEEKDYFNDCYMALEHGRQFMDNMSGGKVDETL
VKTTCLHHWSKRNAVDVSMLCSQDVLRVLLTLHPVLQDAIQKKRTRSWGFQGPLTWQQFH
KMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPFGSQRDVAYLVV
CPENEALLNGAKSFFRDLTAVYESCRLGQHRPISKVYSDGIIRVGSTAAKKLTDQPVSEW
FLKAASNNSDAFAKLKLYAQVCRHDLAPYLAAQSLDSSLLTQPNPPPPTSQSSSTQAQAA
MANMGTGNSLTSSGSAIPNNTMPGASGTTTSSSGPAGMGSGMQSAKPNSFPPFGGMSAGS
MSTLGNPPQSGQPNTQASGLTGENMTGTAQTQAPSEPPESTMERDKVGVPTDGDSHAITY
PPAIVLYIVDPFTYDETEGVAHSSNVWTLGLLRCYLEMIQFLPPHIRNAVSVQIIPCQYL
LQPVKNDERHIYSQHLKSLAFSVFTQCRRPLPASTNVKTLTGFGPGLALDTSLKSPERPE
CLRLYTPPFILAPVKDKQTELGETFGEAAQKYNVLFVGYCLSHDQRWLLGTCTDLYGELL
ETCIINIDVPNRARRKKGSARRMGLQKLWEWCLGLVQMTSLPWRVVIGRLGRIGHGELRD
WSILLSRRNLQSLSRRLKEMCRMCGISAADSPSILSACLVAMEPQGSFVIMPDSVSTGSV
FGRSTTLNMQTSQLNTPQDTSCTHILVFPTSAFVQVANSNYTTENIDLAFNPNNDGADGM
GIFDLLDTGEDLVDPDIISILPASPTNSPVHSPGSHYPHGGDGSKGQSTDRLLSTESHDE
APNILQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVPSVQSDELLH
SKHSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPIHLVVLNQMYNFIMNML
NT seq
6483 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgtttcgtaccaaacggggcaagtctggaggattgccattccaatttgttc
gatctggctgacttgactgggattaaatggaagcggtatgtttggcaaggccccacgtcg
gccccgattctcttcccggtgacggaggaggaccccatcctgtgcagcttcagccgctgc
ctgaaagcggaggtgctgagtgtgtggcgacggcaccacacgcctggccgcagggagctg
tggctcttctggtggggagaagatccgaactttgctgagctcgtacatcacgaactgtca
ggggaggaggatggcgtgtgggagagcggcctgtcttacgagtgccgcacgctgctcttc
aaagccattcacaacctgctggagcgttgcctgatgaaccgcagcttcgtgcgcattggc
aagtggtttgtgaagccctacgagaaggacgagaagcccatcaacaaaagcgagcacttg
tcctgcgcgttcaccttctttctgcacggagacagccacgttgtcacctgcgtggagatc
aaccagcaccagccagtctaccacctgagcgaggagcacctgaccctcgcccagcagtcc
agcagcccctttgaagtgatcctaagcccgttcgggttgaatggaaccctgactggccag
tctttcaagctgtctgacccaccgacccagaagctgattgaggaatggaagcagttctat
cccatcacgtcgagctccaaggagggctcagaggaaaaacaggtgcagatggactgggag
gaagactctctcgctgcagttggagtccttgttggtggagtgcgaatggtgtacccatca
tgccttgtgctggtccctcagtcggacatccctgctgtgacccccatggggtcctcccat
tcctctgctgtctactcgggtgtccaccaagtgcctgcttccacacgagatcctgccatt
tcctctgtgactctcactccaccaacatccccagaggaagtacagacagtggacacccag
tctgcccagaagtgggtgaagttttcttcggtttctgatggcttcagtgccgacagtacg
agtcaccatggaggaaagatccccaggaaactagccagccaggtggtggacaaggtgtgg
caagagtgtaatattaaccgagcccagaacaaacggaaattctctgccattactaatgga
acgtgtgaagaggaggtggttgataaaatcggtgcttgggattttgtggaacccacgcag
aggtccatctgcaactgctcaaggcataaaaacctgaagcagagaggtgctgggccccca
ggtcagccccagcctgctggccagcccccacagccccctctgaaacacaaggccaacgag
aagctggagaagggggacaagcagcagaagaggccgctgacccccttccaccaccgcagc
tctgtgtgcgacgaggtctccctggacccagactctgcgagccagcgcctcggcatccga
tcgcaggacagccgggggcgcttctcaaacctgcggcctgctgacgtggtctctgtggcc
aagacccctcagctccacggaggcactgagatggtcagctccccccctccccctccgctc
agcccccacccctgcgagcggggcgaggacgggggcgagcccatgaagaacccctccacc
ccgcatagccaacacttctaccagcccacccccgagccctgcctggtctcgcagaaagta
gccgaggaacaccggctcgaccatcacccctaccccccggccttccctgagatcctggag
cccactgtgtacgtgggggccgcagtcaaccccgacgacggcagaactgatgcaccttgg
aagttttttgtgcttcctcggaaaaaggactcccaatttcccacaccccagctccccacc
gacaagctgagggatgaccccgtaggatcccaggaaaatgtgtcggttactgagttgatg
gcaaactcgaagaaagcgttaaaggtgtctgatgaattggttcagatgtacctgcagaga
aagaaccagcacctgtctgcagccatctcggacaccgatcacgaacccgaaacggacccc
tacgcgttcgtcgacggagacgtggagttctccttctctgacaagagggacaagcagtgc
ggtgagagggaggtcgggaagaagcacaagccggacgatggaagctcaatatcagctgat
ggggaggatgcaatgtcgttgtttagtccctctggaaaaacggaagcccagcgtgcagat
gctcaaaaccgcatggcttcaaccagcttgatacatgagactgacctggctgtctctatc
aacgatttagacaatcttttcaactctgatgaagatgagcttacgcctggttccagacga
gctgttaatgggatggatggtaaattcagcagtaaggactcaaagccagcagcgctcgac
cccctgtcttgtatcaattctgcagatctgcatcagatgttcccaactcctccatcactg
gagcaacacatcatgggatactccccgatgaacatgaacagcaaagagtacggcagcatg
gacaatgcctcggggatgactgtcctggacggcaattccactttgggaggccacttcaaa
atcgaggtggaggagggcttctgcagtccgaagcaatctgaaatcaaggatttctcattc
gtgtataaagccgagatgagtcagacgtttgtgggctgctccatgttcgcccctctgaag
actctgcccagccagtgtctgcagcccatcaaactaccagaggagtgcatataccggccg
agctggaccgtcggaaaactggagctgctcaatccagtaccagccatgacgtttcttaac
aaagatggcaacatccccagtgtgggcagcgcagtggatcaggattacatccaaacctac
acaccgcagacacacacacccttcatgtccaacagcgccccccctagtaacagcggagca
ggcatcttgccctctcctgctactccccgcttttcagcccccacccccaggacaccccgg
accccccgcactccgagaggagccggggggccatccagcgtacagggctccctcaagtac
gagaactcagacctgtactccccagcttccaccccttccacctgccggcccctaaactct
gtggagccggccacggtgccctccatcccagaagcgcacagcctctacgtcaacctgatc
ctgtcagagtctgtcatgaacctcttcaaggactgcaacttcgacagctgctgcatctgc
gtgtgtaacatgaacatcaagggggccgacgtgggcgtgtacatccccgaccccaactgc
gagctgcagtactcctgcacctgcggcttcagcgccgtcatgaaccgcaagttcggcaac
aactcagggctgttcctggaggacgagctggacatcatcgggcgcagctcggatttcagc
agggaggcggagaagcgctttgaggccctgcggacagcctctgtggagcggagcggcctc
aaagacaagctaccggacgagctaatcctccttctccaggaccagtgcaccaaccccttc
tctcccatcgctgccttcgagcaggaagccacccctgccgccgtgcccaggcccggcctg
gccctctccccctccccacgggtcgaggagaaggattactttaacgactgctacatggcg
ctggagcacggccgccagttcatggacaatatgtctgggggcaaggtggatgaaacgctg
gtgaagacaacttgtttacatcactggtccaaacggaacgctgtggatgtgagcatgctg
tgctctcaggatgtgctccgtgtgctgctcaccctccaccctgtactgcaggatgccatt
cagaagaagcgaacacgatcctggggcttccaggggccccttacgtggcagcaattccac
aaaatggccgggcgtggatcctatggaaccgatgagtccccagagccgctgccgatcccc
acgtttctggtggggtacgagtatgattttgtggtgctgtctccattcggcctgccctat
tgggagaagctgttgctggatccgtttggatcccagagggatgttgcttacctggtggtg
tgtccggaaaacgaggcattgctcaatggggcaaagagcttcttcagggatctcactgca
gtgtatgagtcctgtcggctgggtcagcatcggcccatctccaaagtgtactctgacggt
atcattcgggtcgggagcacggcggcaaagaagctcacagaccagcctgtcagcgagtgg
tttctaaaggcagccagcaacaacagtgatgcctttgccaaactcaaactgtatgcacaa
gtgtgccggcacgacctggctccatatcttgctgctcaatcactcgacagctctttgctg
acccagccgaatccccctcctcccaccagccagtcctcttccacacaggcacaagcagcg
atggctaacatgggcacgggcaactccctgacctccagcggctctgccatccccaacaac
accatgccgggcgcctctggcaccactacttcctcatcgggcccagctggtatgggcagc
gggatgcagtcagccaaacccaactccttccctccattcgggggcatgtctgcaggctcc
atgtccacgctgggcaaccctccgcagagcgggcagcccaacacgcaagcatcaggcctg
accggggagaacatgactgggacagctcaaacacaagctccttcagaacctcctgaaagc
actatggaacgagataaagttggggtccccacagacggtgactcccacgccatcacgtac
ccaccagccattgtcctatacatcgttgaccccttcacttacgacgagacggaaggggta
gcacactcttccaatgtgtggacgctgggacttctacgctgctacttggagatgatccag
ttcttgccgccacatatcaggaatgctgtttctgtacagataatcccttgccagtacctg
ttacagccagtgaagaatgacgagagacacatctattcccagcatttgaaatctctggca
ttctccgtcttcacccagtgccgaagaccactgcctgcctccaccaacgtcaaaacactg
acgggcttcggtccgggcctggcactcgacacttccctcaagagtccagagagacccgaa
tgcttgcgcctctacaccccacccttcatcctggcaccagtgaaggacaaacagacagag
ctcggggagacgtttggagaagccgctcagaaatacaacgtgctctttgtcggctactgt
ttgtctcacgatcaaaggtggcttctcggtacctgtactgacctctacggagagctgttg
gaaacctgcattatcaacattgatgttcccaacagggctcggaggaaaaaaggctctgcc
cgaaggatgggtcttcagaaactgtgggagtggtgcttgggccttgtgcagatgacatca
ctgccgtggagagttgtaatagggcggctcggtagaataggccacggggagttgagagac
tggagtattttactgagccggcgcaatcttcagtcactcagcaggaggctgaaggagatg
tgcaggatgtgtgggatctctgctgcagattctcctagcatcctcagtgcttgtctggtt
gccatggagccgcaggggtccttcgtgatcatgccagattcagtatcaacaggctcggtg
tttggacgcagtacaactctgaatatgcagacttctcaactgaataccccccaagacacg
tcatgcactcacatcctagtgtttccaacatctgcattcgtgcaggtggcaaattcaaac
tataccactgagaacattgacctggcgttcaaccccaataacgatggagcagatggaatg
ggcatctttgatttgttagacacaggggaggacctggttgacccagacatcatcagtatc
ttgcctgcatctcccacaaattcaccagtacattcgccaggctcacactacccacatggg
ggggatggaagcaaggggcagagtacagaccggctgctctccacagaatctcatgatgaa
gctcctaacattctccagcagcctctggctcttggctattttgtatcgaccgccaaagct
ggccctctgccagactggttttggtctgcttgcccgcaagcacagaaccaatgtccactt
ttccttaaggcctctttgcacctccatgtgccttcagtgcaatcggacgagctccttcac
agtaaacactcccaccctctcgactcaaaccagacctccgacgtcctcaggtttgtgttg
gaacagtacaacgccctctcctggctgacctgtgacccagcgacccaggaccggcgctcc
tgtctcccaatccacttggtggtgctcaatcagatgtacaacttcatcatgaatatgcta
tga
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