Polyodon spathula (Mississippi paddlefish): 121308488
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Entry
121308488 CDS
T07273
Name
(RefSeq) histone-lysine N-methyltransferase Smyd1-like isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00310
Lysine degradation
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121308488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121308488
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
121308488
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
121308488
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121308488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
DUF5889
FRG1
CEP209_CC5
Motif
Other DBs
NCBI-GeneID:
121308488
NCBI-ProteinID:
XP_041096890
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All DBs
Position
1:2189057..2208107
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AA seq
491 aa
AA seq
DB search
MALENMENVEVFNSEGKGRGLRATKEMWAGDILFAEPSYSAVVFDSLTQGVCHTCFKKQL
KLQRCGHCKFAHYCDRTCQKEGWAEHKSECSAIKKNGSVPNENIRLAARILWRIEKEGSA
LSEGRLTSLDDLENHLDDLGEDDMKELKVDVHNFLDFWPSNCRMFGVQYISHIFGLINCN
GFTLSDQRGLQAVGVGIFPNLCLVNHNCWPNCTVILNNGNHEAVNSMFHTQMRIELRAIG
KISPGEELTVSYVDFLCLSQDRRKQLKLQYHFDCTCEHCTKGIKDDLMEAVKEEEGNKPS
AEVVKEVMKFSTDTFQKIEKSRSEGNYHEVVKYCRECLKRQEPVLAETNIHMLRVLSIAS
EVLSYLQCFQEASDYSNKMVQGYLKLYHPNNAQLGMATMRAGVTHWHAGLIEVAHGMICK
AYAILMVTHGPTHPITKDLEAIRMQTEMELRMFQQNEYVYYSMREAALKNQPMKMMAEPG
QEAIPPLFHKK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggctctggaaaatatggagaacgttgaggtgttcaactctgaaggcaagggcaggggg
cttcgagccaccaaagagatgtgggctggggacatcctttttgcagagccatcctactcc
gctgtggtctttgacagcctgacgcagggggtgtgccacacctgctttaagaaacagctg
aagctccaacgatgtgggcactgcaagtttgcccactactgtgaccgtacctgtcagaaa
gagggctgggcagaacacaagagcgagtgtagtgccatcaagaagaatggcagtgtaccg
aacgagaacatcaggctggcggctcgtatcctgtggcggatcgagaaggaaggcagcgcc
ctgtccgagggccggctcacctccctcgatgacctggagaaccacttggatgaccttggg
gaggacgacatgaaggaactgaaggtggacgtccataacttcctggacttctggccgagt
aactgccgcatgtttggtgtgcagtacatctcccacatcttcggactgatcaactgtaat
ggattcactctgagtgatcagcgagggctccaggcagtgggagtgggaatcttcccaaac
ctgtgcctggtaaatcacaactgctggcccaactgcaccgtcatcctcaacaacggcaat
cacgaggcagtaaactcaatgtttcacacccagatgaggatcgagctgcgtgccatcggg
aagatctccccaggagaggagctcactgtgtcctacgtggatttcctctgcctgagtcag
gaccgcaggaagcagctgaagctgcagtaccacttcgactgtacatgcgagcactgcacc
aaggggatcaaggacgacctcatggaggctgtcaaagaggaggaaggaaacaagccttca
gcggaggtggtgaaggaggtgatgaagttcagcactgacacctttcaaaagattgagaaa
tcaagatcagagggcaactatcacgaggtggtgaagtactgtcgggagtgtctgaagagg
caggagccggtcctggccgagaccaacatccacatgctgcgggtcctgagcatcgcctcc
gaggtgctgtcctacctgcagtgcttccaggaggcttctgactactcaaacaagatggta
cagggatacctgaagctgtaccacccgaacaatgcacagctgggcatggctaccatgagg
gcgggtgtgacgcactggcacgcagggctgatcgaggttgcgcacggcatgatctgcaag
gcctatgccatcctaatggtaacacatgggcccacacaccccatcaccaaggacctggag
gcaatccggatgcagacggagatggagctgcgcatgttccagcagaacgaatatgtgtac
tacagcatgcgtgaggcagcgctcaagaaccagcccatgaagatgatggctgagccggga
caggaggccatcccccccctcttccataagaagtaa
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