Polyodon spathula (Mississippi paddlefish): 121308520
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Entry
121308520 CDS
T07273
Symbol
hip1
Name
(RefSeq) huntingtin-interacting protein 1 isoform X1
KO
K04559
huntingtin interacting protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121308520 (hip1)
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
121308520 (hip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
121308520
NCBI-ProteinID:
XP_041096897
LinkDB
All DBs
Position
Unknown
AA seq
1049 aa
AA seq
DB search
MDRVKNSMQQVQNPIPKVLNRRAGANSLEAEKENFERSQVVSINKAINAQEVAVKEKHAR
TCILGTHHEKGALTFWAAVHRLPLSSNAVLCWKFCHVFHKLLRDGHHSVLKDSMRNKADL
SDMSRMWGHLSEGYGRLCSIYLKLLITKMEFHSKNPRFPGNLMMTDKQLDETGENDVNNF
FQMTVEMFDYLECELNLFLAVFNSLDMSRSVSVTTAGQCRLAPLIQVILDCSHLYDYIVK
LLFKLHSCLPADTLQGHRDRFQEQFRKLKDLLYRSSNLQYFKRLIQIPQLPENPPNFLRA
SALSEHISPVVVIPLESSSPDNEPSVETEELVDMDTALQPTHGESKFDDLFGTSSASDPF
NFNSQNGMYKDDKDRLIEQLSRDIRALKEELETFKAESHRLCQALRGRISELEAELAEQT
HLKQQALDEGEFLRAELEDLRRRREDTEKAQRSLTEVEKKAQANEQRYAKLKEKYTELVQ
SHAELLRKNAEVTRQVTVARAAQDEVESVRREMQEKLKEAQEESQHRDEEQSEKLQVLQR
ELAGSREQLSTLRASITSSQQMSTDLSSKIEALEQDKGGLAEAVAQKEAELSVLGVELER
LQSTLSSERDSAVKTAEVLQNQLNEKESHEQALERQLAAERLALLRSSVEEGERIIQDAL
ARLEHPAHIGCTSSADYLVSRSQAALESLNRLQTGQQQYLSDPTDVSELLRAVAQLAHLV
GDTIVQGSATSHMAPQEQADMLSEAVKSCGGDALVFLQLLKEEETLGSADSTVLREGLAR
ITCIGEELRPKGLDIDQGELGDLVEQELAATSAAVESAAARVEEMLSQARAADTGIKMEV
NERILASCTDLMQAIKVLILSSKDLQRDIVESGRGAASTKEFYAKNSRWTEGLISASKAV
GYGATVMVDAADLVVQGKGKFEELMVCSHEIAASTAQLVAASKVKADKGSANLGRLQQAS
RGVNQATASVVASTKNAKSQIEDTETMDFSSMTLTQIKRQEMDSQVRVLELENHLQKERQ
KLGELRKKHYELAGVAEGWEEEEGTGAGC
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggatcgagtgaagaactcaatgcagcaggtccagaacccaattccgaaagtgctgaac
cgccgggcgggagccaacagcttagaggcggagaaggagaactttgagcggagccaggtt
gtcagcatcaacaaggccattaatgcccaagaggttgctgtgaaggagaagcatgccagg
acctgcatcctggggacgcatcacgagaagggcgcgctcacgttctgggctgcagtccac
cggctccccctctccagcaacgccgtgctctgctggaagttctgccacgtcttccacaag
ctgctgcgtgatggccaccacagcgtcctgaaagactccatgaggaacaaggcagacttg
agtgatatgagcaggatgtggggccatctgagtgagggttacggcaggctgtgcagcatc
tacctcaaactgctcatcaccaaaatggagttccacagcaagaacccacgctttcctggg
aacctcatgatgacagacaaacagctggacgagaccggggagaatgacgtcaacaacttc
ttccagatgacggtggaaatgtttgattatctggagtgtgagctgaacctgttcctggca
gtgttcaactctctggacatgtcccgctctgtgtccgtgacgacagctggacagtgtcgg
ctggccccgctcattcaggtcatcctggactgcagccatctgtacgactacattgtgaaa
ctgctcttcaaactgcattcctgtctccctgcagataccttgcaaggccaccgagacaga
ttccaggagcagttcaggaaattaaaggatcttttgtaccgatcaagtaacctgcagtat
ttcaagagactcattcagatcccacagctgccagagaaccccccgaatttcctgcgtgcc
tcggctctgtcggagcacatcagcccggtggtggtgatcccgctggagagctcctccccc
gataatgagcccagcgtggagactgaggagctggtggacatggacactgcgctgcagccg
actcatggcgaaagcaaatttgacgacctcttcggaacctcttcagccagcgatccgttt
aatttcaacagtcagaatgggatgtacaaggatgataaagaccgtctcatcgagcagctg
tccagagacatcagggctctgaaggaggagctggagaccttcaaggctgagagtcaccgg
ctgtgccaggccctgcgggggcggatcagtgagctggaggcggagctggcagagcagaca
cacctgaagcagcaggcgctggacgagggggagttcctgcgagccgagctggaggacctg
cgcaggaggagggaggacacagagaaagcacagcgcagcctcaccgaggttgagaagaaa
gcccaggccaacgagcagaggtacgccaaactgaaagagaagtacacagagctggtgcag
agccacgccgagctgctgaggaagaatgcggaggtgaccaggcaggtgacggtggctcga
gcggcgcaggacgaggtggagagcgtcaggagggagatgcaggagaagctgaaggaggct
caggaggagagccagcacagagatgaagagcagagcgagaagctgcaggtcctgcagaga
gagctggctgggagtcgagagcagctgagcacactgcgggcctccatcacctcctcacag
cagatgagcacggatctgagctccaagattgaggctctggagcaggacaagggcggtcta
gccgaggcggtggcgcagaaggaggcggagctctctgtgttgggggtggagctagagcgg
ctgcagagcaccctgtcgagcgagcgggacagcgcagtgaaaacagcagaggtgctgcag
aaccagctcaacgagaaggagagccatgagcaggccctggagaggcagctggcagcggag
aggctggccctgctcaggagtagcgtggaggagggggagaggatcatccaggacgcactg
gcccggctcgagcaccccgctcacatcggctgcaccagctctgcagattacctggtatcc
agaagccaggctgcgctggagtccctcaacaggctacagacaggccagcagcagtacctg
agtgacccgacagatgtgagcgagctgctgcgagcggtcgcccagttggcccacctggtg
ggggacacgatcgtgcagggcagcgccacctcccacatggctcctcaggagcaggcagac
atgctctccgaggctgtgaagtcctgcgggggggacgctctggtgttcctgcagctgctg
aaggaggaggagaccctgggcagcgctgacagcaccgtgctgagggagggcctagccagg
ataacctgcatcggggaggagctgagaccgaagggtctggatattgaccagggggagctg
ggggacctggtagagcaggagctggcagccacctccgcagcagtggagtctgcagcagcc
agagtcgaggaaatgctgagccaggcccgagctgcagacaccgggatcaaaatggaggtc
aatgagaggatcctggcctcctgcactgacctcatgcaggcgatcaaggtgctgatcctg
tcctccaaggacctccagcgtgacatcgtggagagcgggaggggggcagcatcaactaag
gagttctatgcgaagaattcccgctggacagagggcctgatctcagcctccaaggctgtc
ggctatggagccacggtgatggtagacgcggcagacctggtcgtccagggcaagggcaag
ttcgaggagctgatggtgtgttctcacgagatcgcagccagtacagcgcagctagtggct
gcctccaaggtgaaggctgacaagggcagtgccaacctgggcaggctgcagcaggcctcc
cgaggggtgaaccaggccaccgccagcgtcgtggcttctaccaagaacgccaagtcccag
atcgaggacacagagactatggacttctccagcatgaccctcactcagattaagaggcag
gagatggattcccaggtgcgtgtgctggagctggagaatcacctgcagaaggagcgtcag
aagctgggcgagctgaggaagaagcactacgagctggccggagtggcagagggctgggag
gaggaggaggggacaggcgctggctgctga
DBGET
integrated database retrieval system
