Polyodon spathula (Mississippi paddlefish): 121308536
Help
Entry
121308536 CDS
T07273
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03030
DNA replication
pspa03410
Base excision repair
pspa03420
Nucleotide excision repair
pspa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121308536 (rfc2)
03410 Base excision repair
121308536 (rfc2)
03420 Nucleotide excision repair
121308536 (rfc2)
03430 Mismatch repair
121308536 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pspa03032
]
121308536 (rfc2)
03036 Chromosome and associated proteins [BR:
pspa03036
]
121308536 (rfc2)
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121308536 (rfc2)
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121308536 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
121308536 (rfc2)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121308536 (rfc2)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121308536 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
121308536 (rfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
AAA_14
AAA_16
RCF1-5-like_lid
AAA_24
Viral_helicase1
Mg_chelatase
AAA_11
Rad17
RuvB_N
AAA_19
MipZ
AAA_assoc_2
nSTAND3
AAA_5
AAA_18
ABC_tran
AAA_28
DNAX_ATPase_lid
AAA_23
AAA_30
AAA_25
MeaB
SLFN-g3_helicase
NTPase_1
RNA_helicase
FtsK_SpoIIIE
bpMoxR
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
121308536
NCBI-ProteinID:
XP_041096921
LinkDB
All DBs
Position
Unknown
AA seq
355 aa
AA seq
DB search
MEVEMKETGASEAEERQPGKDSASSAAGKGASGAYEMPWVEKYRPLKLNEIVGNEETVSR
LAVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNK
IKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIE
PIQSRCAVLRYTKLTDAQVLARLMEVIEKEKVQSTDDGLEAVIFTAQGDMRQALNNLQST
NSGFGYVNSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWKLGYSPEDIIGNI
FRVCKTFQMPEYLKLEFIKEIGYTHMRVAEGVNSLLQMAGLLGRLCAKTAAPAAS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaaatgaaagagactggtgccagcgaggcggaggagaggcagcccgggaag
gactcggcaagctcggcggctgggaaaggggcgagcggcgcgtatgagatgccctgggtg
gaaaagtatagaccattaaagctgaacgaaatagtggggaatgaagagacagtcagcagg
ctagcggtgtttgcaagagaaggcaatgtacctaacattatcattgcaggtcctccaggc
actggtaagacgaccagtatcttgtgcctggcccgggcgctgctgggtcctgccatgaag
gatgcggtgctggagctcaatgcctccaatgacagaggtattgacgttgtaagaaacaaa
atcaagatgtttgcccagcagaaggtgacgctgccgaaagggcgacacaagatcatcatc
ctggatgaagcggacagcatgactgatggagcccagcaagccctcaggaggacaatggag
atctactcaaaaacaacccgctttgcattagcctgtaatgcctcggacaagatcatagag
ccaatccagtcccgctgcgctgtgctgcgctacaccaagctgacagacgcgcaggtcctg
gcccggctcatggaggttatagagaaggagaaggtgcagagcactgatgatgggctggag
gccgtcatcttcacagcgcagggggacatgagacaggcattgaacaatttgcagtctaca
aattctggatttggctatgtcaacagtgaaaatgtgtttaaggtctgtgatgagcctcac
cccctgctcgtgaaagagatgattcaacactgtgtgaatgccaatatcgacgaggcttac
aagattcttgcccatctttggaagctgggttactcccccgaagatatcatcggaaacatt
ttcagagtttgcaaaaccttccagatgcccgagtaccttaaactggagttcatcaaggag
atcggctacacccacatgagggtggctgaaggggtgaactctctgctgcagatggctgga
ctcctgggacgactctgtgcaaagacagccgcccctgcagccagctaa
DBGET
integrated database retrieval system
