Polyodon spathula (Mississippi paddlefish): 121308603
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Entry
121308603 CDS
T07273
Name
(RefSeq) class E basic helix-loop-helix protein 22-like
KO
K09086
class B basic helix-loop-helix protein 4/5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121308603
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Tal/Twist/Atonal/Hen, Pancreatic factors
121308603
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Effector_1
Dynactin_p22
Antimicrobial_8
Motif
Other DBs
NCBI-GeneID:
121308603
NCBI-ProteinID:
XP_041097016
LinkDB
All DBs
Position
3:72601803..72603066
Genome browser
AA seq
269 aa
AA seq
DB search
MERSMNINGAEGDIFHKTVSAVSGKKMDSFRSPVGIDLQSRDRQSPNNCFDQSDSDPIQH
GGLGGGKGGLLSLHTGSLCVNYGESGNRTPAAESSGGEQSLDDDSDDRCDMVLMSDQMTS
VSRSKAGGSGKKHKEQKVLRLNINARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKIA
TLLLAKNYILMQAQALEEMRRLVAYLNQGQAISAASLPATTALNPGLGAYEQPAGYPFPA
GLAAASCPDKCAIFNNVTSSLCKQCTDKP
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagtatgaacattaacggagcagaaggggacatcttccacaaaactgtaagc
gccgtctcaggcaaaaagatggactctttcagatcacccgtcggtatcgatctgcagtcc
agggatcgccaatcaccgaacaactgtttcgatcagtctgactctgacccaatacagcac
gggggattaggcggaggtaaaggaggcttgctcagtcttcatactggatctttgtgtgtc
aactacggggaaagtggcaataggactccggcagctgaaagcagcggtggggagcaaagc
ctagacgatgacagcgacgatcggtgtgatatggtactaatgagtgatcagatgacatcg
gtgtcaagaagcaaagctggaggttccggcaagaaacacaaagagcagaaggtactacga
ctgaatattaacgctcgagagagaagaaggatgcacgacttaaacgatgctttggacgaa
ctaagatcagtgatcccttacgctcacagcccctctgtgagaaaactctctaaaatcgct
actttgctactcgccaaaaactacatcctcatgcaggcacaggctctggaagaaatgcga
aggctggtggcttacctcaaccaaggccaagctatctctgcagcctccctgccagccacg
actgcccttaacccgggcttgggtgcctacgaacagccggcagggtaccccttccctgcc
ggactggcagccgcgtcatgtccagacaaatgtgccatattcaacaacgtcacctccagc
ctctgcaaacagtgcactgataagccttaa
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