Polyodon spathula (Mississippi paddlefish): 121308622
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Entry
121308622 CDS
T07273
Name
(RefSeq) RILP-like protein 1
KO
K13883
Rab-interacting lysosomal protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04145
Phagosome
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121308622
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121308622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121308622
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
121308622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RILP
RH1
DUF5713
Motif
Other DBs
NCBI-GeneID:
121308622
NCBI-ProteinID:
XP_041097044
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MEQSERKVNPACLERHYLALTVDDVYDAAKLIGVEVEKLIDCHGKESAEGLVPKIVKVLE
LLESFAARNNTPEKELLRAFETLQVQQQRKKTAKEAEDRAGRSEIRDLELKEQKWRKKAE
DMQVQVSQLREQNQQLLSQLTCNHSQEDSTLRKEREIMLKLKEVVDKQRDEIRAQGQEIS
SRTREVEALQEQLERFMKMNGDLRHKQSVAQAQVKSAVERKADLEADLKAREKEIERLSA
SLRELQQEGAQVVLKNMEMDLTDKMVIDLKDPNRPCFTKQELKQILVERNELKANLFLVQ
EELCYYQREILNDERCPGFLMEAVSAAINKQRRKIKAKMLGIPEGECSSDEEERGSFLSG
RETGMDCIDGKPAESRIRNLFGILSRQGSGKRSPEPKQPAGSWEIIGAEEATQSPNTEPS
SPK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaagcgagaggaaagtgaaccccgcttgtctggaaagacattacttggctctg
actgtggacgatgtttacgacgctgccaagctgatcggggtcgaggtagaaaaattaatc
gactgccacggcaaggagagcgccgagggtctggtgcccaaaatagtgaaagttttggag
ctgctagagagcttcgccgccaggaacaacactcccgagaaggagctgcttcgagccttc
gagacactgcaggtccagcagcagaggaaaaaaacggcgaaggaagccgaggacagagcc
ggcagaagcgaaatcagggacctggagttgaaggagcagaaatggcgtaagaaagcagag
gatatgcaagttcaggtgagccagctccgagagcagaaccagcagctcctgagccagctc
acctgcaaccactcccaggaagacagcaccctgaggaaggagcgcgagatcatgctgaag
ctgaaggaggtggtcgataaacagagggatgagattcgagctcagggccaggagatctcc
agcaggaccagggaggtggaagcgctgcaggagcagctggagcgcttcatgaagatgaac
ggggacctgcggcacaagcagtccgtcgcccaggcgcaggtgaagagcgcggtggagagg
aaggctgacctggaggccgacctcaaggcgagggagaaggagatcgagaggctgagcgcc
agcctgagggagctgcagcaggagggagcccaggtggttctgaagaacatggagatggac
ctcactgataagatggtgatcgacctgaaggaccccaacagaccctgtttcaccaaacag
gaactgaagcagatcctggtggagaggaacgaactcaaagccaacctcttcctggtgcag
gaggagctgtgctactaccagagggagatcctgaatgatgaacgttgccctggcttcctc
atggaggcggtcagtgctgccatcaataagcagaggaggaagatcaaagccaagatgctg
ggcatcccggagggagagtgcagcagtgatgaggaggagcgaggatccttcctctctggg
agggagactgggatggactgtattgatggcaagcctgcagagtcccggatcagaaacctg
tttggaatcctgtcccgtcaagggagtgggaagagatctcctgagccgaagcagcctgcg
ggatcatgggaaatcattggagcagaagaagcaacgcagtctcccaacacagaacccagc
tcaccaaaatga
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