Polyodon spathula (Mississippi paddlefish): 121308735
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Entry
121308735 CDS
T07273
Symbol
hnf1ba
Name
(RefSeq) hepatocyte nuclear factor 1-beta-A isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121308735 (hnf1ba)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
121308735 (hnf1ba)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
121308735
NCBI-ProteinID:
XP_041097245
LinkDB
All DBs
Position
Unknown
AA seq
586 aa
AA seq
DB search
MFLKMVSKLTSLQQELLGALLNSGVSKEVLIRALDDMDPNPATAFGVKLENLQMSPPSSK
MNGSDSDSKPVFHTLTNGHSKCSKMSGDEGSEDGDDFETPPILKELQSLNTEEAAEQRAE
VDRILNEDPWRAARMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALY
TWYVRKQREILRQFNQDTQGSGSNMTDKVTQDQVLFFFPEFNQQGQGGMGQAGAGDEAGA
EPASKKMRRNRFKWGPASQQILYQAYERQKNPSKEEREALVEECNRAECLQRGVSPSKAH
GLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYTVGPGHSMNPLLSHSSPHQPQSNSSP
HSKMTGVRYSQQGASEVTSSTTISHHGNNAMATSQSVLQQVSPGGLDPSHSLLSPDSKMI
SVSGGGLPPVSTLTNIHSLSQTSHHGHQQTQNLIMTPLSGVMAITQSLNTSQAQSVPVIN
SVTGSLAALQPVQFPQQLHSPHQQSLMQQSPSHMGQQPFMATVTQLQNSHMYSHKQEPPQ
YSHSSRFPSAMVVTDTSSIMPSSKQDATVNKMMQLGGLSWCPLQAW
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaaaatggtgtccaagctgacatcattacagcaggagctcctgggcgcgctc
ttgaattctggagtttccaaagaggttctgatccgagcgctggacgacatggacccgaac
cccgccaccgccttcggagtgaaactggaaaacttgcaaatgtccccgccgagttccaaa
atgaacgggagcgactcggactccaaaccggtcttccacactttgaccaacggacacagc
aagtgcagcaagatgtccggggacgagggctcggaagacggagacgatttcgaaaccccc
ccgattctcaaagagctccagtcgctcaacacggaggaagcagccgagcaaagagcagaa
gtggacagaatattaaacgaggacccgtggcgcgctgcgcggatgatcaaggggtacatg
cagcaacacaacatccctcaaagggaagtggtggatgtgacggggctcaaccagtcgcac
ctctcccagcacctcaacaagggcactccgatgaagactcagaaacgagccgcgctctac
acctggtacgtgaggaaacagcgagagatactgagacaattcaaccaggatacacaaggt
tctggcagcaatatgacagacaaagtgactcaggatcaggtcctgtttttctttccagag
tttaatcagcaagggcaggggggtatgggacaggccggagctggagacgaggccggagct
gaacctgccagcaagaagatgcgtcgcaaccgcttcaaatgggggccggcgtcccagcaa
atactctaccaggcttacgagaggcagaagaaccccagcaaggaggagagagaggcgctg
gtggaggagtgtaacagagcggagtgtctgcagcgaggcgtgtccccgtcgaaggcacac
ggactgggctcaaacctggtcactgaagtccgggtctacaactggtttgcaaacagaagg
aaagaagaagccttccggcagaaactagccatggacgcctacactgtggggccggggcac
agcatgaaccccttgctgtcacacagctccccacaccaaccccagtccaactcctctcca
cacagcaagatgacaggtgtcaggtacagccagcagggagctagtgaggtcacttcctcc
acaaccatcagtcaccacggcaacaacgccatggcaaccagccagtcagttttacagcag
gtgtcaccgggaggcctagacccaagccacagcctactgtcacctgactccaagatgatc
tcagtctcaggaggagggcttcccccagtcagcactctgacaaacatccacagtctatcc
cagacttctcaccacgggcaccagcagacccagaacctcatcatgacccccctgtccgga
gtgatggccatcacacagagtttgaacacgtcccaggcacagagcgtcccggttatcaac
agcgtgactgggagcctggcagccctgcagccagtccagttccctcagcaactgcacagt
ccccaccagcagagcttaatgcaacagtctcccagtcacatgggccagcagcctttcatg
gccacagtcacccagctgcagaattctcacatgtactcccacaagcaggagcccccacag
tactctcactcctcccgcttcccctccgccatggtcgtcacggacaccagcagcatcatg
ccctccagtaaacaggatgccactgtaaacaagatgatgcagctcggggggctgtcctgg
tgtcccttgcaagcttggtga
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