Polyodon spathula (Mississippi paddlefish): 121308859
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Entry
121308859 CDS
T07273
Name
(RefSeq) homeobox protein Hox-C4a-like
KO
K09304
homeobox protein HoxA/B/C/D4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121308859
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121308859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Auxin_canalis
Homeobox_KN
DUF2209
Motif
Other DBs
NCBI-GeneID:
121308859
NCBI-ProteinID:
XP_041097467
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MIMSSYLMDSNYIDPKFPPCEEYSQNSYIPDHSPEYYSRTRGDPGYQHHHQELFPPRPSY
QDRQYSCGNIPDPENPTAHQRGHGHPQAGHLLASKPQAAPCEPAAPLPNTPAIPTPAPPP
PSCSQANPDHPSAAASTKQPVVYPWMKKIHVSTVSPSFNGAEPKRSRTAYTRQQVLELEK
EFHYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKKDHRLPNTKVRSSASSGSSTA
TTAGSSAAAAAAPSVSATEELSRLTAQEPAEDITRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgagttcgtatttgatggactctaactacatcgatccgaaattccctccgtgt
gaggaatattcgcaaaacagctacatcccagaccacagccccgagtattacagccggaca
agaggggacccgggctatcaacatcatcaccaggagctgttccctccacggccaagctac
caggatcgtcaatacagctgtgggaacatccccgatccggagaatccaaccgcgcaccag
agggggcatgggcacccccaagccgggcacctcctcgcttcaaagccgcaagcagcccct
tgcgagccagcagctccattgcccaatacccctgccatcccaacgcctgcaccaccacct
ccctcctgcagccaggcaaacccggatcatccgagcgccgctgcttccaccaagcagccc
gtggtttacccttggatgaagaaaatccacgtcagtaccgtgtctcccagtttcaatgga
gcggaaccaaagcggtctcggactgcttacacccgacagcaagtgttagaattggaaaaa
gaattccactataacaggtacctaacgcggcggagacgcatcgagatcgcccattccttg
gtgctttctgaaaggcagatcaaaatctggtttcagaacaggaggatgaagtggaaaaaa
gatcacaggttacccaataccaaagtcagatcctcggcttcttcgggttcatctacagcc
acgaccgccgggtcgtctgccgcagccgctgccgctccaagtgtctctgccaccgaagaa
ctctcacggctcaccgcgcaggagccagcggaagacattacaaggctataa
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