Polyodon spathula (Mississippi paddlefish): 121308984
Help
Entry
121308984 CDS
T07273
Symbol
mbd6
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K26585
methyl-CpG-binding domain protein 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121308984 (mbd6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121308984 (mbd6)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
121308984 (mbd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
Carb_bind
Motif
Other DBs
NCBI-GeneID:
121308984
NCBI-ProteinID:
XP_041097693
LinkDB
All DBs
Position
Unknown
AA seq
1562 aa
AA seq
DB search
MNGGNERGRDKDGGTSAAHVPIGWQRAVEGGRVAYISPSGTVLSTVEEVRTYLLTDGTCK
CGLECPLVLPKVFNFDPGAAVKPHSTEKVKAEEDMTKLCNHRRKVVAMAALCRSMEASPL
ALPGQTPGGALNCPENPPAAHSRSPNTGLNKSPPDFKNNLFPKYFVDKAASGVGTPFPGP
KQDHCTYPRQRLLNPSGLIQYPRHHPAIPATAGLNPPSKNSMYAGGHPSNGSLDAITRAN
SRLSPELPHLGSPQPGRNLMPSPAQSPRAFGQAGNMPCSSGSQKYTRFTSPPNQTYDLSG
CSDHLKGSPYPNSLPPSAQSHTHALDIHVSSTLASLANSLGGRSMHEVQGNFTPSSFSAR
SNTMGSPSTFSSSISSPAGSLEISPQRSRHSSTSSEHGFLGQQVTKSSHSPMPMSSPKFF
MPPSPKSRLEGILQQYKDTSNSGSNSLGNHLHHPHQSNNFQPPHPPHSPTLEKKIQAAGA
ASATGFLGLPLGQILNQHHPHSSSFPASSLLSAAAKAQLASQKNNGSPGKEAHTKVQSTL
QNSLPNKQTSPLLSNSSTTPSSTAPQDKPFKRKRQRRSPTVLTMLKESQMNSLRTGVDQM
SMEKTFSFPLGAPQQQTVDFNPGLNQSDSAQSAGFPRQAEAQDPLRSKTPGVGAAQPLSA
LLHLLSMQNAQGGGGSSGSSLGQPALQSQSPAAAPSPVHLPPFPQPNPGSDRAWTPNLGG
PSPSPSQQAFMNVNLNAALASVADPAGTTADSSMFPSMQDLNSQLLGLLGQFSTQTPSSA
SSSSSSSSPGAAQGSGSSNLAAQLKAPAATSEAMPGLPSNNGNHQHNQQSNTVTGPTNLP
ASPTSTNHKLAPSPGPVALHTPCQQLPLAELFPFMNPDQLLQLLSANTGLTPLLNPPFIG
SLPLGLLMGQQQHQQQPQNILNHNPLNLLPSLLGGQADLPVNLLGLLNPPPNAVLPLSDP
ADKQALQALLTASLLLGQQQQPAMLPLGGLNLGSLNLDFLQQQFPPPQDGEKPTDATLLP
GNDGFHGLGDGALQALQALLFPALSTPAPPIPTTLLSLNPALLPAFLGSTDGGASQTQVG
ISSSSMGPTSMTSTSTTTTPSSGAEAPPAMSMGDPLLSFSGAPGKLNPLGPQLLNPLLGA
SLLGDLAAFNTSSMQLSSLHTLLASSPLLLPGQQQHHLLPALQPPHLGMHLIQGQAALPG
QAGTMNPMAGLLNTLQLNIDPGLPMADNKPINTTNQLEESISPAPAEDLPANQLPPEHLQ
TSQPLPQRSSPLDPYGSFMDAIYNSFLQVTGKKAQEAAGPTGHSVGQSGASGPSLSALSA
LAPTANLQASYPQFHGDAPALQAQNVPPSHSPRRACSVRNQDLTRLGMEAAHSPARGTPK
LTEESRTPPRFEGVPAGKANSSRSSAQLLSSTPAFPGSLDEAKTDSSCQYSNGGHPRTEP
PCRQDEPPLFRGCKGESGPSEGGGQEDPALCVYPSSRADCLNGTVLCPIIDQEIHPALHE
TEEGKGDSVQQETPKRGRKRRQTQQKLNSSSKEAFTEDLANLEPKAPAIQRPAKNKRRKI
VR
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaggcaatgagagaggcagagacaaagatggcggcacgtctgcagcgcacgtt
cctattggctggcaaagagcagtggagggagggagagtggcctacatcagccccagcggt
acagtcctatccactgtggaggaagtgaggacctaccttctgacagatggcacctgtaag
tgcggtctggaatgccccttggttctacccaaggtgtttaatttcgaccctggagcagca
gtgaagcctcacagtaccgagaaggtgaaggcagaggaggacatgaccaaactgtgcaat
cacaggaggaaagtggtcgccatggcagcgctgtgcaggagcatggaggcctcccccctc
gccttacccggccaaactccaggtggcgctcttaactgtccagagaaccctccagcagcg
cacagcagatcaccaaacacgggcctcaacaaatcccctcccgatttcaagaacaacttg
tttccgaaatactttgtggacaaagcggccagcggtgtggggaccccctttccaggcccc
aaacaagaccattgcacttacccccgacagcggcttctcaaccccagcgggctgattcag
taccccagacaccaccccgcgatccctgccacagctgggctcaatcccccttctaagaac
tccatgtacgctggaggacatccatccaatggaagcctggatgcaataacaagggctaac
tccaggctgtctccagaactccctcacttagggtctccccagcccgggaggaacctgatg
ccttcccccgcccaatctccaagggcctttggtcaagctggcaacatgccttgcagctca
gggtcccagaaatacaccaggtttaccagtcctccaaaccaaacgtacgatctttcggga
tgctctgatcacctcaagggttctccctacccgaactccctcccaccttctgcacagtct
cacacccacgctctggatatccacgtatcttcgactttagcttcactggccaacagcctg
ggcggtaggtctatgcatgaggtccaagggaacttcactccttcctcattctccgccaga
tccaatactatgggctccccatccaccttctcttcctccatctcctcacctgccgggagc
ttggagatctctccgcagaggtccaggcattcttcgacctcctccgagcatggcttcctt
gggcaacaggtaaccaagtcctctcattccccaatgcccatgagctctcccaaattcttc
atgccacctagccccaaaagccgcctggaaggcattctccaacaatataaggacaccagc
aacagcgggagcaattccttaggcaaccacctccaccacccccaccaaagcaataacttc
cagccgcctcatccgccccattctcctacgttggagaagaagatccaagcggcaggagct
gccagcgctaccggattcctcggtctccctttaggtcagattctgaaccagcaccacccc
cactcctcctcctttccagcgagcagcctgctctccgcagctgctaaagctcagctggca
agccagaagaacaatggctctcccggcaaggaggctcacaccaaggtacaaagcacttta
cagaacagcctccccaataaacagaccagccctctgctctccaactccagcaccaccccc
agctccacagcgcctcaggacaagccgttcaagaggaagagacaaaggagatctccaaca
gtccttaccatgctcaaagaatcccagatgaatagtctccgaactggggtggaccagatg
tctatggagaagaccttctctttccccttgggtgctccccagcagcaaactgtggacttt
aatcctgggctaaaccagtctgactcggctcagtctgccggcttccccaggcaagcagaa
gctcaggatcctctgagaagcaagaccccgggtgttggtgcagctcagcctttgtctgcc
ctgcttcacttactcagcatgcagaacgctcaaggtggtggcggcagcagcgggagctcc
cttggccagcctgctctccaatctcaaagccccgccgctgctccctctccagtccacctc
cctccattcccccagcccaacccaggatctgaccgagcttggacccccaacttgggaggt
ccgtccccatctccaagccagcaggcattcatgaacgtgaatttgaacgctgccctggct
tctgtggctgatccagcaggcactaccgcagactccagtatgttccccagcatgcaagat
ctcaacagccagctgcttggcctcctagggcagttctccacccagaccccctcctctgcc
tcctcctcctcctcttcctcgtcccctggtgcagctcagggctcggggagcagtaacctg
gctgcacaactgaaggctccagcagccacaagcgaggctatgccaggcttacccagcaac
aatggtaaccatcagcataatcagcagagcaatactgtcacaggacccaccaacctacca
gcatcgccaacgtccaccaatcacaaactggcccctagccctggccctgtggcgctccac
accccctgccagcagcttcccctagcagagctgttccccttcatgaacccggaccagctt
ctgcagctcctgtccgccaacactgggctgacccctcttctaaacccccccttcattgga
tctctccccctgggcttgctgatgggtcaacagcaacaccaacagcagccccaaaacatc
ctaaaccacaaccccctaaacctcctcccttccttgctggggggccaagcggacctgcca
gtgaacctcctgggcctcctaaacccgccacccaacgctgttctgcccctcagcgaccct
gccgacaagcaggccctgcaggctctcctgactgcctccctcttgctcgggcagcagcag
cagccagccatgctccctctaggtgggctaaatctgggcagccttaacctggatttcctt
cagcagcagttccctcccccccaggacggagagaagcccacggacgccaccttgctgccg
ggcaacgacgggttccacggtctgggggacggtgccctccaggccctgcaggccctgctc
ttcccagccctgtccacccctgcccctcccatccccaccacgttgctgtctctcaaccct
gctctcctgcctgctttcctgggctccactgacgggggcgccagccaaactcaggtcggt
atctccagttcctccatgggacctacctccatgaccagcacttctaccacgaccaccccc
agctcgggagctgaagcccccccagccatgtcgatgggagaccccctcctgtcatttagt
ggggccccagggaagctgaaccccctgggacctcagctgctgaacccgctactgggagcc
agcctgcttggtgacttggcagccttcaataccagcagcatgcagctcagcagtcttcac
accctgttggcttccagccctctgctcctgccaggccagcagcaacaccacctcctccct
gccttgcagccaccccacctgggcatgcacctaatccagggccaggctgcgctacccgga
caggctgggaccatgaatccaatggcaggcctgctaaacaccctgcagctcaatatcgac
ccgggtctcccaatggccgacaacaagccaataaacactacaaaccagttggaggaaagc
ataagccccgcccctgctgaggacctcccggcgaatcagctgccaccagagcacctgcag
acctctcagccgctcccccagcgctcaagccccctggacccttatggatcctttatggat
gccatttataactccttcctccaagtcacgggcaaaaaggcccaggaagcagctggcccg
acgggacattctgtaggccagtccggggcttctgggcctagtctcagtgctttgagtgcc
ttagctcccactgccaacctccaagcctcttatccacaattccatggagacgccccagct
ctgcaggctcaaaacgtaccgccttcacacagccccaggagggcgtgcagcgtccggaac
caggacttgaccaggctagggatggaggcagcccactctccggcaagggggacccccaaa
ctgaccgaggagagcaggacgccccccaggtttgaaggggtcccggccgggaaagcgaac
agcagccggagcagcgcccagctgctgagctccacaccggctttcccaggctcactcgat
gaagcaaagactgattcctcctgccagtacagcaacggggggcaccccaggactgagcca
ccgtgccggcaggacgagcctcccctcttcaggggctgcaagggggagagcggcccttcc
gaagggggagggcaggaggatccagccctgtgtgtctaccccagcagcagggcagattgt
ctgaacggcacagtgttgtgtcccataatcgaccaggagatccatccagccctgcacgaa
acggaggagggaaagggtgactctgtccagcaggagaccccaaaaagaggacgcaagaga
agacaaacacaacagaagctgaacagcagttcgaaagaggccttcactgaagacttggca
aatctggagccgaaagccccagcaattcagagaccagcgaaaaacaagagaaggaagatt
gtcagatag
DBGET
integrated database retrieval system
