Polyodon spathula (Mississippi paddlefish): 121309015
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Entry
121309015 CDS
T07273
Symbol
dtx3
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX3 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121309015 (dtx3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121309015 (dtx3)
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121309015 (dtx3)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121309015 (dtx3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_10
zf-rbx1
zf-RING_4
Prok-RING_4
RING_XB3-XBAT31
Sina_RING
zf-RING_6
zf-C3HC4_4
RovC_DNA-bd
zf-Nse
Motif
Other DBs
NCBI-GeneID:
121309015
NCBI-ProteinID:
XP_041097785
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MDLRPHTTISSATMSVRAGRNSDEVVLSQPLWDCLTAGQQRVTDFQAKHGLCVVRQSESP
GCCTVRLRPAEGQGPVSMATRKAFVSLCRAVHKEMTKQVTPKRKRSLREALRCVSGRDKG
GPRRSQRQKLTREQAMEFEEQPPSQESSSVNIEGEEEPSCSICMGEMVDKKTLDKCGHSF
CKSCLERAFQVKRACPVCRLVYGQLVGNQPDNGRMTVERDPDLELPGHEGYGCICIIYSF
LPGIQGEEHPNPGVCYPGTDRVAYLPDSPEGNRALAMLKKAFDQRLIFTIGTSMTTGMSN
VITWNDIHHKTCIWGGPRCFGYPDPTYLVRVMEELREKGVTAD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggatctccgaccccatacaacaatatcttcagccacgatgagcgtgcgagcggggagg
aacagtgacgaggtggtcctttctcagcccctctgggactgtttaactgctggccagcag
cgcgtgacggatttccaggcgaagcacggtctgtgtgtggtgaggcagagtgagagcccg
ggctgctgcacagtcaggctgcggcccgctgagggccagggccccgtctccatggcgacc
cgcaaggcctttgtttccctgtgcagggccgtccacaaggaaatgaccaaacaagtaacg
cccaagagaaagcggtctctccgggaggccctgaggtgcgtgagcgggagggacaagggt
ggcccacgcaggtcccagaggcagaagctgacgagggagcaagccatggagtttgaggag
cagcctccgagccaggagagctccagcgtgaacatcgaaggggaggaggagcccagctgc
tccatctgcatgggtgagatggtggataaaaagactctggacaagtgtggccattccttc
tgcaagagctgcctggaacgggctttccaggtgaagagggcctgcccggtgtgccggctg
gtctatgggcagctcgtggggaatcagcccgataacggtagaatgactgtggagagggac
cccgacttggagctgccgggacatgagggctacggctgcatctgcatcatttacagcttc
ctgcccgggattcaaggggaagagcaccccaatccgggggtatgttacccgggcacagac
agagtggcgtacctgccggacagcccagaggggaaccgcgccctggccatgctgaagaag
gccttcgatcagaggcttatctttaccattggcacctccatgaccacgggcatgagcaac
gtcatcacctggaacgacatccaccacaagacctgcatctggggcggcccgcgctgcttc
ggttatccagacccaacctatctcgtgagagtgatggaggagcttcgagagaagggagtc
actgccgattga
DBGET
integrated database retrieval system
