Polyodon spathula (Mississippi paddlefish): 121309113
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Entry
121309113 CDS
T07273
Symbol
mcoln1a
Name
(RefSeq) mucolipin-1a
KO
K04992
mucolipin 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
pspa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121309113 (mcoln1a)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
121309113 (mcoln1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121309113 (mcoln1a)
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121309113 (mcoln1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCLN_ECD
PKD_channel
Ion_trans
Motif
Other DBs
NCBI-GeneID:
121309113
NCBI-ProteinID:
XP_041097933
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MSPCDKYHAKGRKPFKLVLQILKIVIVTVQLVLFGLSNQMVVMFKEENTMSFKHLFLKDY
SDGGDDTYAVYTQGDLYKSIFYTVDQYLALSNSTMGRYAYVWGQKANESALYLCQQYYKK
GRIDPVNDTFDIDPTVVTSCVGVNPLASPNEFRGSYKNFTLKFHKLINVTIEFKLKAINI
QTIINNEIPDCYTFTITVLFDNKAHSGRVKISLINQASIKECKDPSVSGHAENYSRLTFD
VFVVIVCLFSLVLCGRSIIRGLMLQYEFVQYFQVHFSQTVSWDDRMEFVNGWYILLVISD
VLTITGSFIKMGIESKNLASYDECSILLGTSTLLVWVGVIRYLSFFQKYNILIVTLRAAF
PNVIRFCCCVAFIYLGYCFCGWIVLGPYHVKFRSLSMVSECLFSLINGDDMFVTFSEMQQ
NNFLVWLFSQVYLYTFISLFIYMVLSLFIALITGAYETIKHQTMEPMHITELHSFIATCK
DTPNSGKFRGIETSACSIFCCCDRTTNYEDALLIN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagcccctgtgacaagtaccacgcaaagggacgcaagccgttcaaactggtgctgcag
attctgaagattgtcattgtcactgtgcagttggtgctgtttggactcagtaatcagatg
gtggtcatgttcaaagaggagaacaccatgtccttcaaacacctcttcctgaaggattac
tctgatggaggggacgacacttacgcagtgtacacccaaggagacctctacaagagcatc
ttctacactgtggaccagtacctggctctctctaactccaccatgggacgctacgcttac
gtctgggggcaaaaggccaacgagagcgccctctacctgtgccagcagtactacaagaaa
gggaggattgaccctgtgaacgataccttcgatatcgaccccaccgttgtcacgagttgt
gttggagtcaatcccctggcgtcgcctaacgaattcagaggcagctacaagaactttact
ctcaagttccacaaactcataaatgtgacgatcgagtttaaactgaaagcgatcaacatc
cagaccatcattaacaacgagatcccagactgttacacgttcaccatcacggtactgttc
gacaataaagctcacagcggaagggttaagatcagcctgatcaaccaagcctcgatcaaa
gagtgtaaagaccccagcgtgtccggccatgcggagaactactcacggctgacgtttgac
gtgtttgtggtgattgtctgtttgttctccctcgtgctgtgtggccgttccattatccga
ggactgatgctgcaatatgagttcgttcagtacttccaggtccactttagccagacggtc
agctgggatgaccgcatggagttcgtcaacggctggtacatcctgctggtcatcagcgat
gtcctgaccatcaccggcagcttcattaagatgggcatcgagtccaagaacctggcctcc
tatgatgagtgcagtatactgctgggtacctccaccctgctggtctgggtgggagtcatc
cgatacctcagcttcttccagaaatacaacatcctgatcgtgacgctgagagctgccttc
cccaatgtgatccggttctgctgctgcgtcgctttcatctacctgggatactgcttctgt
ggctggatcgtgctgggaccctaccacgtcaagttccgctccctgtccatggtctcggag
tgcctcttctccctgatcaacggggacgacatgtttgtcaccttctcggagatgcagcag
aacaacttcctggtgtggctcttcagccaggtgtacctgtacaccttcatcagcctcttc
atctacatggtgctcagcctcttcatcgccctcatcaccggagcctatgagaccatcaag
caccagacaatggagcctatgcacatcacagagctccattccttcatagcgacgtgtaag
gacaccccaaactcgggcaagtttcggggtatcgagacctccgcctgctccatattctgc
tgctgtgaccgaaccacgaactacgaagacgccttactgataaactga
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