Polyodon spathula (Mississippi paddlefish): 121309134
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Entry
121309134 CDS
T07273
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00270
Cysteine and methionine metabolism
pspa01100
Metabolic pathways
Module
pspa_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
121309134 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121309134 (dnmt1)
03032 DNA replication proteins [BR:
pspa03032
]
121309134 (dnmt1)
03036 Chromosome and associated proteins [BR:
pspa03036
]
121309134 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pspa02048
]
121309134 (dnmt1)
Enzymes [BR:
pspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
121309134 (dnmt1)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
121309134 (dnmt1)
DNA replication proteins [BR:
pspa03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
121309134 (dnmt1)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
121309134 (dnmt1)
Prokaryotic defense system [BR:
pspa02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
121309134 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAH
DNA_methylase
DNMT1-RFD
DMAP_binding
zf-CXXC
Motif
Other DBs
NCBI-GeneID:
121309134
NCBI-ProteinID:
XP_041097962
LinkDB
All DBs
Position
Unknown
AA seq
1514 aa
AA seq
DB search
MPAKTSFAIPEDVRIRLQALDKDRDGLAEKDCVKEKLGLVHGFLQADAQNQLSDLETKLQ
KKELSEEGYLSQVKTLLSEELASENGSAVLNGKANGCSENGAVASDEDCTPANGQEDEDA
MDAQEEGVQSPSAAKPRGGRRSRTGVDGKKSPASSRVTRNSGKQLSILSMFSKVSQKRKS
EEANGESEPAKEECDVSANTEEKAQDEKRLKVEPTQKSDADEAASTQTPKAELPAKTPPP
KCPDCRQYLDDTDLRFFQGDPDNALDEPEMLTNERLSLFDANEDGFESYDDLPQHKITNF
SIYDRKGHLCPFDSGLIEKNVELYFSCVVKPIYDDNPCMDGGVPAKKLGPINAWWITGFD
GGEKALIGFTTAFADYILMDPSEEYAPIFALMQEKIYMSKIVVQFLQKNPEVTYEDLLNK
IETTVPPAGLNFNKFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDLIKLAGV
TLGKSMLLYWRAARRQAIRHPTKIDKDKGPTKATTTKLVSQIFDAFFSDQIDQEDKENAV
KRRRCGVCEVCQTPDCGKCNACKDMIKFGGSGRLKQACQKRRCPNLAVKEAEEDETVEEE
DLLPVKTPPKKMVQVKKKKKQSKGKMSWMGEPVQTVGKKDYYMQVRVDDEVLEVGDCVSV
GSHDPSEPIFLARITSLWDDGTEKMFHAHWFCRGTDTVLGESSDPLELFLVDECEDMQLA
YVQGKVSVSYKGPSENWFMEGGLIDDTKVGEDDGKSYFYQFWYQPDYARFETPPTVTQSE
DCKFTFCVSCTRQAEIEERDTPRVFDPLDENSSSNKTLYALACLSGEQYRVGDGVYLLPE
AFSFSVKSGSPVKRPQRKEDVDEELYPEYYRKSSDYIKGSNLDAPEPFRVGRIKEIFCTK
RSNGKANETDIKLRIYKYYRPENTHKGAKSSYHTDINMLYWSDEEVTVDFKDVQGRCTVE
YAEDLVEPVQEYSNGGPDRFYFLEAYNPKTKSFEDPPNHARSAFNKGKGKGKGKGKGKGK
SSAPMEQECRELNPPKLRTLDVFSGCGGLSEGFHQAGISETNWAIEMWEPAAQAFRLNNP
GTTVFTEDCNTLLKLVMSGEETNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSK
FKNSLVVSYLSYCDYYRPKFFLLENVRNFVSFKRSMVLKLTLRCLVQMGYQCTFGVLQAG
QYGVAQTRRRAIILAAAPGETLPRYPEPLHVFAPRACSLSVVVGEKRYVSNVTRVNCGPY
RTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQIRGSQYQPILREHICKDMSALVA
ARMRHIPLAPGSDWRDLPNMEVRLSDGTMTKKLRYTHPDKKNGRSSTGALRGVCTCAGGK
PCDPADRQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPE
QHRVVSVRECSRSQGFPDTYRFFGNVLDKHRQVGNAVPPPLSKAIGLEIKKCMIKKMKEN
STETVKQEKVETTE
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atgccggccaagacatccttcgctatcccagaagacgtcaggatcagacttcaggctttg
gataaagatcgcgatggtctagcagaaaaggactgtgtgaaagagaagctgggtttggtg
catggctttttacaagcagatgcccagaatcagctcagcgatctggagaccaagctacag
aagaaggagctttcagaagaggggtatttatctcaagtcaagacgctgctcagtgaggag
ctggcgtccgagaatggaagcgcggtgctcaacggaaaggcgaacggctgctccgagaac
ggggctgtcgccagcgacgaggactgcacccctgcgaacggacaggaggatgaagacgcg
atggacgcccaggaggagggagtccagtctcccagcgctgctaagcctcgtgggggtagg
aggagcagaacgggagtggatgggaaaaagtctccagctagctcaagggtcacaagaaat
tctggcaaacagctgtcaatcttgtcaatgttttctaaagtctcacagaagcgcaaatct
gaagaggcgaatggagaaagtgaaccagccaaggaggagtgtgacgtctcagcaaacact
gaagaaaaggcacaagatgaaaagaggttgaaagtcgaacctacccaaaagtcagacgcc
gatgaggcagcctctacacagacgccaaaagccgaactgccagctaagaccccgcctcca
aaatgcccagactgccggcaatacctggacgacacagacctccggtttttccagggtgat
ccggataatgctctggatgagcccgagatgctgaccaatgagaggctgtctctcttcgat
gccaacgaagacgggtttgagagctacgacgacctgcctcaacacaaaatcacaaacttc
agcatctatgacaggaaaggccacctctgcccctttgactccgggctgattgagaagaat
gtggagctgtacttcagttgtgtcgtgaaaccaatctatgatgacaacccttgtatggac
ggtggcgttcctgctaagaagcttgggcccatcaatgcctggtggataactgggtttgac
ggtggagaaaaggctttgattggcttcactacagctttcgctgactacatcttgatggac
cccagcgaggagtatgcgcccatctttgctctgatgcaggagaagatctacatgagtaag
attgtcgtgcagttcctgcagaagaacccagaggtcacctatgaggacctgctcaacaaa
attgagaccacagtgccccctgctggcttgaacttcaacaagttcacagaggacaccctg
ctgcgccacgcccagttcgtggtggagcaggtggagagctacgacgaggccggcgactct
gatgagcagcccatcattgtgactccctgcatgagggacctgatcaaactggctggggtg
accctggggaagagcatgttactgtactggcgggcagctcggagacaagccatccggcac
ccgaccaaaatcgataaggacaagggacccaccaaagccaccaccaccaagctggtgtcc
cagatcttcgatgccttcttctccgaccaaatcgatcaggaagacaaggagaacgcggtg
aagcggagacgctgtggcgtgtgcgaggtgtgccagacccccgactgcgggaaatgcaat
gcctgcaaggatatgatcaaattcggagggagtggacgcctcaaacaggcgtgccagaag
agaaggtgtccgaacttggccgtgaaggaggcagaggaggatgagactgtagaggaagag
gacctgctccctgttaagacccctccaaagaagatggtccaagtgaagaagaagaagaaa
cagagcaagggcaagatgtcgtggatgggagagcctgtccagactgtagggaagaaggat
tactacatgcaggtccgtgttgatgacgaggtcttggaggtcggtgactgcgtctcggtt
ggatctcacgacccttcagagcccatcttcctggcaaggattacttccctatgggacgac
ggcacggagaagatgttccatgctcactggttctgccgagggacagacactgtcctgggg
gagtcctctgaccctctggagctcttcctggtggacgagtgcgaggatatgcagctggcc
tacgtccagggcaaagtcagcgtctcgtacaaagggccttcggagaactggtttatggag
ggaggcttgatcgatgacactaaagtaggcgaagacgatgggaagagctacttctatcag
ttctggtatcagcctgactacgcccggtttgagactcctccaacagtcacgcagtcggag
gactgcaagttcacgttttgtgtcagctgcactcgccaagctgagatcgaggagcgggac
acccccagagtctttgatcccctggatgaaaacagctcctctaacaaaaccttgtacgca
ctggcgtgcctgagcggggagcagtacagagtcggggacggagtctatcttctgccagaa
gccttttcgttcagtgtgaagtctggcagtccagtgaagcgaccccagaggaaggaggat
gtggatgaggagctgtacccagagtattacaggaagtcttcagactacatcaagggcagc
aacctggacgcccccgagccgttccgcgtgggccgcatcaaggagatcttctgcaccaag
cgcagcaacggcaaagccaacgagacggacatcaaactgcgcatttacaagtactacagg
cctgagaacactcacaagggagccaagtcaagctaccacactgacatcaacatgctgtac
tggagcgacgaggaggtcactgtggacttcaaggatgttcagggccgctgcactgtggag
tacgcggaggatctcgtagagccggtccaggagtactccaacgggggaccggacaggttt
tacttccttgaggcatacaatcccaagactaagagctttgaagatcctcccaaccatgct
cgcagtgcttttaacaaaggcaagggcaaaggaaaaggcaagggaaaaggtaaagggaag
tcctccgctccaatggagcaggagtgtcgggagctgaacccgcccaagctgcgcaccctg
gacgtgttctctggctgtggggggctgtctgagggctttcatcaagcgggtatttctgag
actaactgggcgatcgagatgtgggagcccgcagcccaagcattccgtctcaacaacccg
ggcaccacggtgttcacggaggactgcaacaccctgctgaagctggtcatgtctggagag
gagaccaactcgctggggcagaggctgcctcagaagggggacgtggagatgctgtgcggg
ggccctccgtgccaaggcttcagcggcatgaaccgattcaactcccgaacctattccaag
ttcaagaactccctggtggtgtcttatcttagttactgtgactactacaggcccaaattc
ttcctgctggaaaacgtgaggaactttgtctccttcaagcgctccatggtgttgaagctg
accctgcgctgtctggtgcaaatgggctaccagtgtacctttggggtgctgcaggctggt
cagtacggagtcgctcagacccgcaggagagcgatcatcctggctgcagccccgggagag
acgctgccccggtaccccgagcccctgcatgtgtttgcaccccgcgcctgctccctcagc
gtggtggtgggagagaagagatacgtcagcaatgtcaccagggtgaactgcggcccgtac
aggaccatcacggtgcgggacacaatgtcggacctccctgagatccggaacggtgcctct
gcgctggagatctcctacaacggagagcctcagtcctggttccagaggcagatccgcgga
tctcagtaccagcccatcctgcgggaacacatctgcaaggacatgagcgcgctggtagcg
gcgcgaatgagacacatccccctggctccgggttcagattggcgtgacctgcccaacatg
gaggtccgcctgtctgacggcaccatgaccaagaaactgcgctacacccatccggacaaa
aagaacggccgcagcagtaccggagcgctccgaggggtgtgcacctgcgcaggaggtaag
ccatgtgacccagcagaccggcagtttaacaccctgatcccctggtgcctgccccacact
gggaacagacacaaccactgggccggcctgtatggaagactggagtgggacgggttcttc
agcacaaccgtgactaaccctgagcccatgggcaagcagggccgtgtgcttcaccccgag
cagcacagagtggtcagtgtgcgagagtgctctcggtcccaaggattcccagacacttac
aggttctttgggaatgtcttggacaagcacagacaggttggcaatgcagtaccgcctcct
ctctcaaaagccattgggttggagatcaaaaaatgcatgatcaagaagatgaaagaaaac
tctacagagaccgtgaaacaggagaaggtggagacgacagaatga
DBGET
integrated database retrieval system
