Polyodon spathula (Mississippi paddlefish): 121309358
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Entry
121309358 CDS
T07273
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121309358
Enzymes [BR:
pspa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121309358
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121309358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121309358
NCBI-ProteinID:
XP_041098173
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
RGGEGPDGKDRLRLSLSLSLSLSLLQCLVLAPTRELAQQVQQVAYEYGKTSRIKSTCIYG
GAPRGPQIRDLERGVEVCIATPGRLIDFLEAGKTTMNRCTYLVLDEADRMLDMGFEPQIR
KIIEQIRPDRQTLMWSATWPKEVRQLAEDFLRDPVQINVGALELSANHNILQIVDVCQES
DKDSKLLQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWV
LTEFRNGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTKKGTAYT
FFTPGNLRQARDLVRVLQEARQAVNPKLLQLADSGRGGGGGGGRLRYRGGGSDANNPNLM
YMDQCERRMRGGGSSSRGGSGSERSNSNSNKHSSSSSSTTTTSSSHREQSYNHGAPQEQP
QYARAPGAPPLPLMAQQFIPPQPPPIMSFMFPPQPAPRK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
aggggaggagagggacccgatggcaaggatcgcctccgactctctctctctctctctctc
tctctctctctcttgcagtgtctggtcctcgctccgactcgtgagcttgcgcagcaggtc
cagcaagtggcgtacgagtacgggaagacgtcccgcatcaagagcacctgcatctacggg
ggggcccccaggggcccgcagatcagggacctggagagaggtgtagaggtctgcattgct
acccccggccggctcattgatttcctggaggctgggaagacgaccatgaaccgctgcacc
tacctggttctggacgaggctgacaggatgctggacatgggcttcgagccccagatccgc
aagatcatcgagcagatcaggccggatcgccagaccctcatgtggagcgccacctggcca
aaggaggtgaggcagctggcagaggatttcctgcgggacccggtgcagatcaacgtgggg
gcgctggagctgagcgccaaccacaacatcctgcagatagtggacgtgtgccaggagagc
gacaaggacagcaagctgctccagctgatggaggagatcatggccgagaaggagaacaag
accatcatctttgtggagacgaagaagcgctgtgatgaactgacccgcaggatgaggaga
gacgggtggcctgccatgtgtatccatggagacaagagccagcctgagagggactgggtg
ctaacagaatttcgcaacgggaaggctccgatcctcatcgcgacagacgtggcgtcccgc
ggattagacgtggaggacgtgaagttcgtgattaactacgactaccccaactcctccgag
gactacgtgcatcgcatcggtcgtacggcgcgaagcaccaagaagggcacggcctatacc
ttcttcacccccgggaacctgcgccaggcccgggacctggtcagagtgctgcaggaggcc
aggcaggccgtcaaccccaagctgcttcagctcgccgattcggggagagggggcgggggt
ggtggtggtcgcctgcggtaccgcgggggcggctctgacgccaacaaccccaacctgatg
tacatggatcagtgcgagcggcgcatgagaggggggggctcttctagccgggggggcagc
gggagcgagcgcagcaacagcaacagcaacaagcactcctcttcctcctcctccaccacc
accacctcctcctcacacagagagcagagctacaaccacggggccccccaggagcagcct
cagtacgccagggcccccggggccccgcccctccctctcatggctcagcagttcatcccc
cctcagccccctcccatcatgagcttcatgttccctccccagcccgcccctaggaaatag
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