Polyodon spathula (Mississippi paddlefish): 121309414
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Entry
121309414 CDS
T07273
Symbol
vps11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04140
Autophagy - animal
pspa04148
Efferocytosis
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121309414 (vps11)
04148 Efferocytosis
121309414 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121309414 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121309414 (vps11)
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121309414 (vps11)
Hops complex
121309414 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-rbx1
zf-RING_2
zf-C3HC4
zf-C3H2C3
Beta-prop_EML_2
zf-ANAPC11
zf-RING_5
WDR55
zf-RING-like
Beta-prop_RSE1_2nd
zf-RING_UBOX
Shugoshin_N
Motif
Other DBs
NCBI-GeneID:
121309414
NCBI-ProteinID:
XP_041098263
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MAAFLQWRRFVFFDKETVKDPGDAGKGFTLPAGISACDSGRGHIVLGDMEGQIWFLTRSM
QPTPFQAYKLRVTHLFQLKQHSILVSVGQDEQGINPLVKVWNLDKRDSGNPLCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLTLHEGTSPITGLAFR
QSGKTTNLFVATLEKVLCYTLSLKEYPHVELDTHGCALRCTALTDPSQDSQFIVAGDECV
YLYQPDERGPCFGFEGQKLLVHWYRGYLLLLTRDCKTPNNREASPSEKQLLTVYDLDNKF
IAYSAAFDDVIDVLAEWGSIYILTQDRRLCVLQEKDTQTKLEMLFKKNLFVMAINLAKNQ
HLDSDGLSEIFRQYGDHLYVKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHNLTAYL
QALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVEIAIKVLRQAGYYSH
AVFLAEKHTHHEWYLKIQLEDLKNYQEALRYIGRLPFEQAESNMKRYGKTLMHHVPEETT
QLLKGLCTDYRPSRETPADRESLGHPLGNKANSEEFIAIFVNNPRELRAFLEHMMEVEAQ
CPQGVYDTLLELRLQDWAHEQDTQEKNSLQEAVLSLLKSENYSTVFDKALVLCQMHNFKE
GVLYLYEQGQLYQQIMHYYMQNEEYGKVVEACQRYGEKEACLWEQALGYFARKEEDCKEY
ITAVLQHIDRNNLMPPLLVVQTLAHNSTATLSVIKDYLINKLQQESEQISEDERKIREYR
EETTQLRQEIEELRSSAKIFQKTKCSMCNSPLELPSVHFLCSHSFHQHCFESYAESEAEC
PACAPGNRKVMEMLRAQDQKRDLHEHFHRQLKCSNDGFSVVADYFGRGVFNKLTLITDPP
GGKAGAASLDSNLQRDLLIHTKRTV
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtttctgcagtggaggcggttcgtgttcttcgataaggagacggtgaaggat
cccggtgatgccgggaaaggctttaccctcccggccgggatctcggcatgcgactccggt
cgggggcacatcgtactgggagatatggagggtcagatttggttcctgacgcgctccatg
cagcccacccccttccaggcttacaagctgcgtgtcacccacctgttccagctgaagcag
cacagcattctggtgtcagtggggcaggacgagcagggcatcaacccgctggtgaaggtg
tggaatctggacaagcgggacagcgggaatcctctctgcacccggatcttcccagctatt
cccgggaacaagcccacagaggtgtcctgcctcagcgtgcacgagaacctcaacttcatg
gccatcggttttaccgatggcagtgtggtgctgactaaaggagacatcaccagagaccgg
cacagcaaaacactgacgctgcacgagggcaccagcccaatcacggggctcgctttccga
cagtctggcaaaaccacaaacctgtttgtcgccaccctggagaaagtgctgtgctacact
ctctccctgaaggagtaccctcatgtggagctggacactcacggctgtgccctgcgctgc
acagctctgaccgacccgtctcaggactcccagttcatcgtggccggggacgagtgtgtc
tacctgtaccagcccgacgagcgcggaccctgctttgggttcgaggggcagaagctgctg
gtgcactggtaccgcggctacctgctgctgctcacccgtgactgcaagacacccaacaac
agggaggcctctccctcagagaagcagctcctcactgtctatgacctggacaacaagttc
atcgcctacagcgcggccttcgatgacgtcatcgacgtgctggcggagtggggctcgatc
tacatcctgacgcaggaccgtaggctgtgcgtactgcaggagaaggacacgcagaccaaa
ctggagatgctttttaagaagaacctgtttgtgatggccattaacctggcaaagaaccag
cacctggacagcgacggcctgtctgagatcttccggcagtatggagaccacctgtacgtg
aagggggaccatgatggagccatacagcagtacattcgcaccatcgggaagctggagccc
tcctatgtgatccggaagttcctggacgcacagcggatccacaacctcactgcgtacctg
caggctctacacaggcagtccctggccaacgccgaccacaccaccctgctgctgaactgc
tacaccaagctgaaggacagctccaagctggaggagttcatcaagacgagtgagagcgag
gtgcactttgacgtggagatagccatcaaggtgctgcggcaggcggggtattacagccac
gccgtcttcctggcagagaaacacacccaccacgagtggtacctgaagatccagctggaa
gacctcaagaactaccaggaggcgctgcgctacatcgggaggctgcccttcgagcaggcg
gagagcaacatgaagcgctacggcaagacgctgatgcaccacgtgccagaggagaccaca
cagctgctcaagggactctgcacagactaccgacccagcagagagaccccagcagacagg
gagagcctgggccaccccctggggaacaaggcgaactcggaggagttcatcgcgatcttt
gtgaacaacccccgggagctgcgtgcgttcctggagcacatgatggaggtggaggcacag
tgtccccagggtgtgtacgacaccctgctggagctgaggctgcaggactgggcccacgag
caggacacacaggagaagaattctctacaggaggctgtcttgtccctgctcaagagtgag
aactacagcacagtgtttgacaaggcgctggtgctgtgccagatgcacaatttcaaagaa
ggggtcctgtacctgtatgagcaaggccagctgtaccagcagatcatgcactactacatg
cagaacgaggagtacgggaaggtggtggaggcgtgccagcgctacggggagaaggaggcc
tgcctgtgggagcaggcgctggggtacttcgcccgcaaagaggaggactgcaaggagtac
atcaccgccgtgctgcagcacatcgaccgcaacaacctcatgccccccctgctggtggtg
cagacgctggctcacaactcgacggccactctgtctgtgatcaaggactacctgatcaac
aagctgcagcaggagagcgagcagatctcggaggacgagcgcaagatcagggaataccgc
gaggagacgacccagctccggcaggagatcgaggagctgcgcagcagcgccaagatcttc
cagaagaccaagtgcagcatgtgtaacagccccctggagctgccgtccgtgcacttcctg
tgcagccactcgttccaccagcactgcttcgagagctacgccgagagcgaggccgagtgc
cctgcctgcgcccccggcaaccgcaaggtgatggaaatgctgcgggcgcaggaccagaaa
cgagacctgcacgagcacttccacagacagctcaagtgttcgaatgacgggttctcggtg
gtggctgactatttcggccggggggtctttaacaagctgaccctgatcacggaccccccg
ggggggaaggcgggggctgcgagtctggactccaacctgcagagagacctgcttatccac
accaagaggaccgtgtaa
DBGET
integrated database retrieval system
