Polyodon spathula (Mississippi paddlefish): 121309497
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Entry
121309497 CDS
T07273
Name
(RefSeq) heat shock cognate 70 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
pspa04010
MAPK signaling pathway
pspa04141
Protein processing in endoplasmic reticulum
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121309497
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121309497
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121309497
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121309497
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121309497
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121309497
03009 Ribosome biogenesis [BR:
pspa03009
]
121309497
03110 Chaperones and folding catalysts [BR:
pspa03110
]
121309497
04131 Membrane trafficking [BR:
pspa04131
]
121309497
03051 Proteasome [BR:
pspa03051
]
121309497
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121309497
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121309497
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
121309497
Spliceosome [BR:
pspa03041
]
Complex B
Other components
Prp19 complex
121309497
Complex C
Prp19-CDC5 complex
121309497
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
121309497
Chaperones and folding catalysts [BR:
pspa03110
]
Heat shock proteins
HSP70 / DNAK
121309497
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
121309497
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
121309497
Proteasome [BR:
pspa03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
121309497
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
121309497
Exosome [BR:
pspa04147
]
Exosomal proteins
Proteins found in most exosomes
121309497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
Radial_spoke_3
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
121309497
NCBI-ProteinID:
XP_041098393
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MSKGTAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVA
MNPTNTVFDAKRLIGRKFDDCVVQADMKHWPFTVINDSSRPKVQVEYKGETKSFYPEEIS
SMVLVKMKEIAEAYLGKTITNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAA
IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
FVAEFKRKYKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
RFEELNADLFRGTLDPVEKSLRDAKMDKAQVHDIVLVGGSTRIPKIQKLLQDFFNGKELN
KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMSVLIKRNTTI
PTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDI
DANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKTEDDMQREKVSSKN
ALESYAFNMKSTVEDEKLEGKISSEDKQKILDKCNEVISWLDKNQTAEKDEYEHHQKELE
KVCNPIITKLYQGAGGMPGGMPGGMPGGFPGAGAPSGGSSGPTIEEVD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagggaacagctgttggcattgatctgggaaccacctactcctgcgtgggtgtc
tttcagcatggcaaagttgaaatcattgccaacgaccagggtaacaggaccacacccagc
tacgtagccttcaccgactccgagaggctgatcggggatgctgcaaagaaccaggttgca
atgaatcccaccaacacagtatttgatgcaaagagactaattggtagaaaattcgatgac
tgtgttgtgcaagcagatatgaagcactggcctttcaccgttattaatgattcttcccgt
cctaaagttcaagttgaatacaaaggagagaccaagtccttctaccctgaggaaatctct
tcgatggttctggtcaaaatgaaggagattgcagaagcatatcttggaaaaactattaca
aatgctgttatcacagtcccagcatactttaatgactcccagcgccaggctaccaaagat
gcaggaactatttcgggactcaatgtgcttcgtattattaatgaaccaactgctgctgcc
attgcatatggcttggacaaaaaggttggagctgaaagaaatgtgctcattttcgatctg
ggtggtggcactttcgatgtctccatcctgactattgaagatggaatctttgaagtgaaa
tccactgctggcgacacccatctcggtggagaagactttgacaaccgcatggtcaaccac
tttgttgcggagttcaagcgcaagtacaagaaagacatcagtgacaacaagagagctgtt
cgccgtctccgcaccgcctgcgaaagggcaaagcgcaccctttcgtccagcacccaggcc
agtattgaaattgactccctgtacgaggggatcgatttttacacctccatcaccagggct
cgttttgaggagctgaacgccgacctgttccgcggtactctggaccccgtggagaagtcc
ctccgtgatgccaagatggacaaggcccaggtccacgacattgtgctggtcggaggatct
acccgtatccccaagatccagaagctgctgcaggatttcttcaacgggaaagaactcaac
aagagcatcaacccagatgaggctgttgcctatggagcagctgtgcaggctgccatcctg
tccggggacaagtctgagaatgtgcaggacctgctgctgctggacgtcacccccctgtct
ctgggcattgagacggccggaggcgtcatgagtgtgctgatcaagcgtaacaccactatc
cccaccaagcagacccagaccttcaccacctactctgacaaccagcccggcgtgctcatc
caggtctatgaaggggagcgagccatgaccaaggacaacaacttgctgggcaagtttgaa
ctctcaggtatcccccctgcgccccgtggcgtccctcagatcgaggtcactttcgatatt
gatgccaacggcatcctgaatgtgtctgcagtggacaagagcactggcaaggagaacaag
atcaccatcaccaatgacaaaggacgcctgagcaaggaggatatcgagcgcatggtccag
gaagcagagaagtacaagactgaggatgatatgcagcgtgagaaggtctcctccaagaat
gccctggagtcctacgctttcaacatgaagtcgactgtggaggatgagaagctggagggc
aagatcagcagtgaggacaagcagaagatcttggataagtgcaacgaggtcattagctgg
ctggataagaaccagactgctgagaaagatgaatatgaacatcaccagaaggagctggag
aaggtgtgcaatcccatcatcaccaagctgtaccaaggcgctggcgggatgccaggaggg
atgccaggcggtatgcctgggggcttcccaggggcgggggcaccttcaggtggatcctct
ggaccaactatcgaagaagttgattaa
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