Polyodon spathula (Mississippi paddlefish): 121309662
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Entry
121309662 CDS
T07273
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04510
Focal adhesion
pspa04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121309662 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121309662 (lamc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
Laminin_B
Motif
Other DBs
NCBI-GeneID:
121309662
NCBI-ProteinID:
XP_041098644
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
KSYEISYIRLKFHTSRPESFVIYKRTHEGGSWIPYQYYSATCGKTYRKNGKGYLRPGEDE
QQATCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDHSPVLQDWVTATDLLISLNRLNTFG
DEFFKDPNVLRSYYYAISDFSVGGRCKCNGHASECVSNETGRLACNCHHNTAGPDCEKCQ
PFFHDRPWARATADSANECLTCNCSGRSEDCHFDAELYRSTGHGGRCVNCRDGTAGPNCE
GCKENFHRSSPEDVCLPCNCSVIGSSSLQCGGDGNCICKLSVTGEKCDSCQPGYHSLTEG
GCRPCACHPAGSVGLCNPLNGQCDCKENVEGYQCDRCKPGTFNLDSQNPAGCTSCFCYGH
SAACTSSGQYSAFSITSDFTEDLDGWVGEFLDGSESLLIWKEGEIYLLPHTEEDSGFFKA
PGKFLGDKLLSYGQPLSLTFIGESKELLPSFVTLIIEGSGMRLSARLFPQNKTVTDSPPQ
QTFVFRLHEGQAGQQIPLSSFEFHRLLSNLTAIKISNAGGHSYAAQLSEVTLVSAAPGLE
PPAPWVEECICPLGYVGQFCEFCAPGYKRDTPSGGPFARCVPCTCNQHGVCDGETGLCQC
RDNTVGPSCERCADGFYGNALLGTSSDCQPCPCPHQSSCAVIPATGQVVCTDCPPGQRGT
RCEMCDDGFHGDPLGRRGQAKPCRPCQCSGNVDPNAIGVCDHVTGRCFKCLHNTEGDRCE
RCKDGYYGNALDQGTLSKCKPCNCSPSGSVSPSAGCSAQTGQCECLSHVTGRDCSHCETG
FFNLQPGEGCQRCTCNPTGSVSSACHPITGQCLCRPGVEGSACDSCHKGFFSFTARGCRA
CNCSPMGAVTMQCHSNGTCLCREGFVGYKCDQCKVNYFHSRATHQCEECPVCYGLVRDEA
AKLKEKLQALEEQLEKFDCRSHRGYEHYPVQREGSLSNSLEDLLEMQNARDAFLNQFMEL
ETSVRTIQERLSNISRDLNCSGAGNDKHCSALNDTGSSIQATQGQLQLARETLDNMVIPL
DLPREPNKWTILVNESQVLAVSQKSLADYVESVAKKALLASKQTLSLLSTIVEDHSAESY
VRDLAGQFLDMHEAKANLTESVEETLTEAKKAYSSVQRINTEIAEVLTNITDSHTEIPLS
DAVRNKTEELDRLSQSKEELISKAVSELQPQIDSLIKSMESVEQLDPLTARANQSQSLAV
VSVVRGKEVEAEASALLKELEAMKKTWSRKQTQTKVAVKKMRMVKEKVMVDAKKKTKQAV
NAVTPAVSDSSQAIAKAREAKRLATEAAADAKAALKESEKSSGKATELSWTMSAVLHQVA
AQEMKAAELKRDMWEMEEIAANMGCVREDMKTAKRSLESCALVLKDLLAKLETSQVDEKF
ESILNETETQLRILQLGMQNEGLRLRIQTLHEAARQQESQMKEVEKDIAQILEEKINLED
IAQNLPEGCFNRPQTGRG
NT seq
4379 nt
NT seq
+upstream
nt +downstream
nt
gaaaatcctatgaaatcagttatatccgactcaagtttcacaccagccggccagagagtt
ttgtcatttacaagaggactcatgagggaggctcctggatcccgtaccagtactacagcg
ccacctgtggcaaaacctacagaaaaaacggcaaaggatacctccgcccaggagaggatg
agcagcaggccacctgtacagacgagttcagcgacatctcacccctcaccggcggcaatg
tggctttctcaactctagaggggcgaccaagtgcctacaactttgaccacagccctgtgc
tgcaggactgggtgacagccactgaccttctcatttccttgaaccggctcaacacctttg
gggatgaattcttcaaagacccaaatgttctccgttcctattattatgccatctcggatt
tctcagtgggaggcaggtgcaaatgcaacggccatgcaagtgagtgtgtaagcaacgaaa
ctgggaggcttgcctgtaattgtcatcacaacactgcgggccctgactgtgagaaatgtc
agccttttttccatgacaggccctgggcaagggcaacagctgactcagctaacgaatgcc
tcacttgcaactgtagcggccgctctgaagactgtcacttcgatgctgagctctaccgga
gcacagggcacggaggccgttgtgtaaactgcagggacggcacggctggacccaactgtg
agggctgcaaagaaaacttccaccgaagcagcccagaggacgtctgtctcccttgcaatt
gcagtgtcatcggttcatcaagcctgcagtgtggaggtgacgggaactgcatctgcaagc
taagtgtaactggggagaaatgtgacagctgtcagccgggataccactcactcactgagg
gtggctgcaggccttgtgcgtgtcacccagccggcagtgtggggttatgtaaccccctga
atggacagtgtgactgcaaggaaaacgtggagggatatcagtgtgacaggtgcaagcctg
gtacttttaatctagattctcagaatcctgctggctgcaccagttgtttctgctatgggc
actctgcagcatgtacctcctcagggcaatactctgcattcagcatcacctcagacttca
cagaggatctggatggctgggtaggggagttcttagatgggtctgaatccctgttgattt
ggaaggagggagagatctatttacttccacacactgaagaagattctggcttctttaaag
caccagggaagtttttgggggacaaactcctcagctacgggcagcccctctctttgacgt
tcataggagaaagcaaggagctcctgccttcctttgtgacgctgataatcgaaggttcgg
ggatgagattgtcggcacgtctttttccgcagaataaaactgtgacagactcccccccgc
aacaaacatttgtattcaggcttcatgagggacaggcaggccagcagatccctttgtcat
cctttgagtttcatcgacttctctccaacctcacagccattaaaataagcaacgctgggg
gccacagctatgcagcccagctatcggaggttaccctcgtgtctgcagccccaggactgg
agcctcctgccccctgggtggaggagtgcatttgccccctggggtacgtggggcagttct
gtgagttctgcgccccagggtataaacgagatacccccagcggcggaccctttgctcgct
gtgtgccctgtacctgcaaccagcacggggtgtgcgatggagagacaggcctatgccagt
gcagagacaacaccgtcgggcctagctgtgagcgctgtgctgacggtttctatggaaacg
ctttacttgggacttccagtgactgccagccctgcccgtgcccgcaccagtccagctgtg
cagtgattccagctacagggcaggtcgtctgtacagactgcccgccagggcaacgaggaa
ctcgctgtgaaatgtgtgacgatggtttccacggtgacccgctggggcgccgtggccagg
caaagccctgtcgtccctgtcagtgcagcgggaacgtggaccccaatgccatcggggtct
gtgaccatgtgaccgggcgctgcttcaagtgcctgcacaacacagagggagaccggtgtg
aacgatgcaaggacggttactacggcaacgcactagaccagggaacactcagcaaatgca
agccttgcaactgcagcccctctgggtcagtgagtccgtccgcaggctgcagtgcccaga
ctgggcagtgtgagtgcctgagtcacgtgaccggacgagactgcagccactgcgagaccg
gcttcttcaacctgcagccaggagagggctgtcagagatgcacctgcaaccccactggtt
cagtatccagcgcctgtcacccaatcacaggacagtgtttgtgccgcccaggggtcgagg
ggtcagcgtgtgactcgtgtcataaaggattcttcagcttcactgcccggggttgcaggg
catgtaactgctcccccatgggtgctgtcaccatgcagtgtcacagcaacggcacctgtt
tgtgtcgggaggggtttgtagggtacaagtgtgatcagtgtaaggtgaactacttccaca
gcagagccacgcaccagtgcgaggagtgcccagtgtgctacggcttggtgagagatgagg
cagccaaactgaaggaaaagctgcaagctttggaagagcagctggagaaattcgattgcc
ggtctcacagaggctacgagcattaccctgtgcaaagggaaggttccctcagcaactcac
tggaggacttactggaaatgcaaaatgccagagacgctttcctgaatcagtttatggaat
tagagacgtcagtccggaccatacaagaaaggctgagcaatatcagccgtgacttgaact
gcagcggggcagggaacgataaacactgcagcgctctcaacgacacaggctccagcatcc
aggccacacagggacagctgcagctagccagggaaacactggacaatatggtgattcccc
ttgatctccccagggaaccgaacaaatggacaatactagtaaatgaatcccaggttctag
ctgtcagtcaaaaatcattggcagattatgtggaatcagtagccaaaaaggctcttttgg
cttcaaagcaaacattgtctctgctttcaaccattgtggaggaccattcagctgaaagct
acgtgagagacctcgcagggcagttcttagatatgcatgaagctaaagccaatttaacag
agtcagtggaggaaacactgacagaagccaagaaagcgtacagttcggtccaaaggatta
acactgagattgccgaggtcctgaccaatatcacagactcacacacggaaatacctctat
cggacgcagtgagaaacaagactgaggagttggatcgattatcacagtctaaagaggaac
tgatcagcaaagcagtgtcggagcttcagccacagatagactccctgatcaaaagcatgg
agagtgtagagcaactcgatccgttaacagcccgtgccaatcaatctcagagcctcgccg
tggtatcggttgtgagggggaaagaagtggaggcagaagccagtgcgttactgaaggagc
tggaggccatgaagaaaacgtggagtcgaaagcaaacccaaaccaaagttgcagtgaaga
agatgaggatggtgaaggagaaggtcatggtggacgccaagaaaaagaccaaacaggcag
tgaacgcggtgaccccagcagtctccgactccagccaggctatcgccaaagcgcgggaag
ccaagagactcgccacggaagcagctgcagatgcaaaagctgctctcaaagaaagtgaga
aatccagcggaaaagctactgaattgagctggacaatgagtgctgtcctgcaccaagtcg
ctgcccaggagatgaaagcagcggagctgaagagagacatgtgggaaatggaagagatag
cggctaacatgggatgtgtcagggaagacatgaagacagccaaacggtccttggagagtt
gcgcattggtcttgaaggatctgcttgcaaagttagagaccagccaggtggacgagaagt
ttgagagcatcttaaacgagacggagactcagctgaggatcctgcagctgggaatgcaga
atgaggggctgaggctgagaatacagacactgcacgaggcagcccgccagcaggagagcc
agatgaaagaggtggagaaggacattgcgcagatcctggaagagaaaatcaatctggagg
acattgcccagaatttgcccgagggctgcttcaacaggccgcagacggggagagggtga
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