Polyodon spathula (Mississippi paddlefish): 121309677
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Entry
121309677 CDS
T07273
Symbol
adamts13
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121309677 (adamts13)
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
121309677 (adamts13)
Peptidases and inhibitors [BR:
pspa01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
121309677 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
TSP1_CCN
TSP1_spondin
Reprolysin_4
Reprolysin_3
Reprolysin_5
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
121309677
NCBI-ProteinID:
XP_041098684
LinkDB
All DBs
Position
Unknown
AA seq
1565 aa
AA seq
DB search
MAQPLLLLLAILPACAALLRSPLEKEFLQSLDLGDVFYYFGKNSSHEVPEFRITWPECSP
QNQAGSPQLCSVSAQGQSYVFEVGRGRGKGPLSCSFAVDRVINTSVSVVQRLPGVCCENP
ALLRPPRARALVSLCQQHLQGVVMGAESRLHIQPIQDKHLPLIDHTGEARPHIAFHLLHR
QGDTQSRAKTLARRQRRVAVAADIRHLELLVVVGPDVHQVHRQDTERYILTNLNIAAELL
RDTTLGATLRVHLIRMVILTEPQAEIEINNNITSSLISVCDWGDKVNPQNDSDPQHADLV
LYITRYDLELPDGNRQVRGVAQLGGACSKGWSCVITEDTGFDLGITIAHEIGHRXGHSDT
AQGNACSSSGFMMASEGGYNSVDLTWSQCSREQFLRFLGQSQAACLDDLPVLEGGLPGWK
PGLYYGADDQCKIAFGGSARACSFTRAGMDVCRVLSCHVNPRDRSSCTRLLIPVLDGTEC
GPNQWCLKGRCVSPSQLKSLEVVHGAWSSWSELSPCSRSCGGGVKSRRRQCNNPRPAFGG
QQCQGQDLEAELCSRQACSSTQLEFMADQCSLTNTEPLFLSPGVPSYYKWIPALGFAKGD
DQCKLMCRSEGKNFMMSRGTHFQDGTRCEPSSADPAVPLSVCVAGRCRVFGCDGRMDSGK
VLDVCGLCGGNSSTCNEITDSYTEGKPREYVTFLTVPVNATHVRIINSKSLFTHLAVQVN
GQYVVSGKGSVSGSSTHPSALEDSRVEYRLHLTEDNLPSSEEVYLLGPVLEETQIQVYRK
YGKEYGEVTSPSISYSFYIPKEKLSFTWAPVTAACSVTCGGGVQKTTYICIDPSTKGAVE
ETHCGGPPQPPIKQEPCSPRPCPPSWQVGEFSPCSATCGIGVRERLLHCVRRHKGLTSKL
PPSKCPQESALHASESCTLEPCPASWRSRARSPCSVSCGGGVQQREVYCARDNGTLEESL
AEESCGHLPRMEDSEPCNTQLCPPRWTVSQLGNCSALCGPGVSSRSVACVRSLNGSDVEV
DERLCPEAERPAEIVSCVVNVCPIGWDLRTWSEAPRMHKTGLYDITHPREQPVYVWSPVI
GQCSVSCGGGEVEISFSCVDHESKAVVTEGQCGETSKPERRLEACNQAPCPPAWRYKAGV
CSASCGGGVAQRVLYCARDGEESEEVLNGTECWAAPRPEEQEPCSPHPCPPRWTVSDAGQ
CSATCGFGVAERSVACVQFDRGTDTEVAETQCPMAGKPSTLVPCMVSACTLSWAVQNWTE
CSASCGNGIQSRQVSCVHQALSQSLSSLFCMHLPKPITIQGCSRGPCPDETPTPGVPGVP
TTSPQSPSHSTPEPATLPAPEDADTSVCGKLLLQDSGIVDLTDVGTRDCLLSIGRPLGEV
IVVKVISSSLNCREREFVLFYDRLMLMKKCERLAGFTRTSRTNVLLIRQGRLAPGSGVLL
HYWSQPAPKRYYGDCDVQLFGSSGELVNPVGSSDPGRQTCRTFINVAPSRKIEIRALGVN
LASAVNRTQSTYILIRDVDALKTSVFHGNQLFFWRSSGSRAEIEFHGEYLAHPGSFRAEY
SVIDP
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcctctgcttctcctgctggcaatcctgccagcttgtgcagccctgttgaga
tctccattagaaaaggaattcttgcagtctctggatctaggagacgttttctactatttt
ggcaaaaactcctctcatgaagttccagagttccggatcacttggcctgagtgcagtccc
cagaaccaggccggcagcccccagctgtgctccgtttcagcccagggacagagctacgtg
tttgaggtcgggagagggagagggaagggccccctctcctgctccttcgctgtggaccgg
gtgataaacacctccgtcagcgtggtgcagcggctcccgggggtctgctgtgagaatcca
gccctgctgcggccccccagagcccgggccctggtcagcctctgccagcaacatctgcaa
ggtgtggtgatgggagccgagagcagattgcatattcagccaattcaggacaagcatctt
cccctgatagaccacaccggtgaagccagacctcacatcgcattccatctgctgcaccga
cagggagacacacagagccgggccaagactctggcccggcgtcagcggagggttgccgtg
gcagcggatatccgtcacctggagctgctggtggtcgtggggcctgacgtgcaccaggtc
cacagacaggacaccgagagatacatcctgacgaacctgaacatcgctgcggagctcctg
agggacaccacgctgggagccacacttcgggtgcatctgatccgcatggtgattctgacg
gagccccaggcagaaatcgagataaacaacaacatcacatcgtctctgatcagcgtgtgc
gactggggtgacaaagtcaacccccaaaacgactcggacccccagcacgccgacctggtc
ctgtacatcacacggtatgacctggagctgcctgacgggaaccgccaagtgaggggcgtg
gcccagctgggaggagcctgctcgaaggggtggagctgtgtcatcaccgaggatactggc
ttcgacctgggcatcaccatcgcgcacgagatcgggcacaggtgagggcatagtgataca
gcacaaggcaacgcctgcagcagcagtggcttcatgatggcctccgaggggggctacaac
agcgtggatctcacctggtcgcagtgcagccgggagcagttccttcgcttcctcggccag
agtcaggctgcctgcctggatgacctgcctgtcctggaggggggtctcccaggctggaag
cccgggctgtactatggggcggacgatcagtgcaagatcgcgttcgggggctccgcgcgg
gcctgctccttcacacgcgccggcatggatgtgtgcagggtgctctcctgtcacgtgaac
cctcgtgatcggagcagctgcactcgcctgctcatccctgtgctggacggcaccgagtgc
ggacccaaccagtggtgtctgaaggggcgctgcgtttccccgtcgcagctcaagtccctg
gaggttgtgcacggagcctggtctagctggtcggagctctctccgtgctcccgctcctgt
gggggaggagtcaagtccagaaggaggcagtgtaacaaccccagacctgcctttggtggt
cagcaatgtcaggggcaggacctggaagctgagctctgcagcagacaggcctgctcaagc
acccagctggagttcatggctgaccagtgctccctcaccaacacagagccgctgttcctc
tcccccggagtgccctcctactacaagtggattcccgctctcggctttgccaaaggtgac
gatcaatgcaagctcatgtgccgatccgaggggaagaatttcatgatgagccgggggacg
catttccaggacggaacgaggtgtgagccgagcagcgctgacccagcagtgcccctcagc
gtgtgtgtggcgggaaggtgcagggtgtttggatgcgatggcaggatggattctgggaag
gtcctggatgtctgtgggctgtgtggaggaaacagctctacgtgcaatgagatcactgac
tcctacacagaggggaagcccagagagtacgtaacctttctgacagtcccagtgaacgca
acgcacgtccgaatcatcaacagcaagtctcttttcacacatctagcggtgcaggtgaat
ggtcagtatgtggtgtcagggaagggaagcgtgtccggcagcagcacacacccctccgct
ctggaggacagcagggtggagtaccggctgcacctgactgaggacaacctgcccagctca
gaggaggtgtacctgctggggccagtgctggaggagacacagatacaggtgtaccggaag
tatggtaaagagtacggggaggtgaccagccccagtatcagctactccttctacatcccc
aaagagaagctgtccttcacgtgggcgcccgtgactgcagcctgctccgtgacctgcggg
gggggggtacagaagactacctatatttgcattgatccaagcacgaagggggcggtggag
gagacacactgcgggggacctccccagccccccatcaaacaggaaccctgcagcccccga
ccctgcccccccagctggcaggtgggggagttcagtccctgcagcgccacctgtggtatt
ggggtgagagagcggctgctccactgtgtgaggcgacacaaggggctgacgagcaaactg
cctccttccaagtgcccccaagaatcagccctgcatgccagcgagagctgcaccctggag
ccctgcccggccagctggaggtccagagcccgctctccttgcagtgtcagctgcggaggg
ggggtgcagcaaagggaggtctactgcgcaagggataatgggacactggaggaatccctt
gctgaggagagctgtgggcacctaccccgcatggaggactcggagccctgcaacacccag
ctctgccccccgaggtggactgtgtcccagctcggtaactgctctgcgctgtgtggcccc
ggggtgtccagccgctctgtggcgtgtgtccggtctctcaacggctccgacgtggaggtg
gacgagcggttgtgtccggaagcagagagacctgcggagatcgtgtcctgtgtggtcaat
gtgtgtcccatcggctgggatttaaggacctggtcagaggctccacggatgcacaagacc
gggctttatgacatcactcaccccagggagcagcctgtgtacgtgtggagccctgtgatt
ggacagtgctctgtgagctgtgggggaggggaggtggaaattagcttctcctgcgtggat
cacgaatcgaaggctgtggtgacggagggacaatgcggggagacttcgaaaccggagagg
aggctggaggcttgtaaccaggcgccgtgccccccagcgtggcgctacaaggccggcgtg
tgcagtgcgtcgtgtggcgggggcgtggcgcagagggtcctgtactgcgcacgggacggc
gaggagagcgaggaggtcctgaacgggacggagtgctgggcagctcccagacctgaagag
caggaaccttgcagcccgcacccctgccctcccaggtggacagtctctgacgctggacag
tgttccgccacatgtggctttggggtggccgagcggtcagtggcctgtgtccagtttgac
agaggaacggatacagaggtggccgaaacgcagtgtcctatggccggcaaaccttcaacc
ctggtcccctgcatggtcagcgcctgcactttaagctgggcagtgcagaactggacagag
tgctctgcttcgtgtggcaatgggatccagtccaggcaggtgtcctgtgtccaccaggct
ctctctcagtctctcagctctctcttctgcatgcacctccccaagcccatcaccatccag
ggctgcagccggggaccctgccctgatgagaccccgaccccaggggtcccgggggtaccc
accacctccccacagagccccagccacagcaccccggaaccagcaaccctgccagcaccg
gaggacgccgataccagtgtctgcggaaagctgctgctccaggactcaggcatcgtggac
ctgacggacgtggggaccagagactgcttgctgtccattggccggccgcttggggaggtc
atcgtggtgaaggtcatctccagctccctgaactgcagagagagggagtttgtgctgttc
tacgaccggctgatgctgatgaagaagtgcgagcgcctggctggcttcacccgcacctcc
cggaccaacgtgctgctgatccgtcagggcagactggcgccgggcagcggagtgctgctg
cattactggagccagcctgcaccgaagagatactacggggactgtgacgtgcagctgttt
ggctcctccggagagctcgtgaaccccgtggggtcctcggatcccgggaggcagacctgc
cgcactttcatcaacgtggcccccagccgaaagattgagatccgggccctcggcgtcaac
ctggcttcagcggtcaacaggacgcagtctacctacatcctgatccgcgacgtcgatgct
ctcaagacctcggtgttccacgggaaccagctgttcttctggcgttcgtcgggaagccgg
gcagaaatcgagttccacggggagtacctggcacacccaggcagcttccgggcagagtat
tccgtcatcgacccctaa
DBGET
integrated database retrieval system
