Polyodon spathula (Mississippi paddlefish): 121309708
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Entry
121309708 CDS
T07273
Symbol
ddx31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121309708 (ddx31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pspa03009
]
121309708 (ddx31)
Enzymes [BR:
pspa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121309708 (ddx31)
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121309708 (ddx31)
Ribosome biogenesis [BR:
pspa03009
]
Eukaryotic type
Pre-60S particles
Helicases
121309708 (ddx31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
121309708
NCBI-ProteinID:
XP_041098749
LinkDB
All DBs
Position
Unknown
AA seq
754 aa
AA seq
DB search
MAEDGLILNIADNPVLHNGSKRFQKSFRLADKWKVRKTAKRAAEGGGLEGPPSKRKPGSP
AKRVPQAAQKATLEKVTPKSLPKIHPKKQVKEGGRTPETALKGKGTPKSRLQTNAAGRED
REGGERPFIKTSSLFRNNPEIPEIHRPAVAQLKEKVFTSDSFSELNLHPHLLSTLNNVLK
VSSMTSVQKQTIPALLDGRDAVVRSQTGSGKTLAYGIPLVQSLQAVQPKIQRSDGPLAVI
VVPTRELALQSFNIIQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILITTPGRLVDH
INNTKSFSFSRIRWLVLDEADRILDLGFEKDVAVILNALNAAQEQRRNVLLSATMTDGVS
KLAGICMKEPVSIQVAEAPAEPRGGGEGALGAPSGGLSESFAVPEKLRQHTVVVPSKLRL
VTLAAFLLGKCKHEKSQKVIVFLSSCESVEFLFAIFKEVLCNNAGNQETREVSPQRPLLD
FMRLHGNMEQEERTEVFQKFSQVKSGILLCTDVAARGLDLPLVTWIVQYTAPASPAEYVH
RVGRTARIGTQGSSLLFLTPTETDYLGVLGSHNISMSEMKVEDILASLMLEDWVKGRGQW
GNKKSHGAVQQEVRERATVLQTEFENFVHSCEENVQAAKKALQSFVRGYATYPASLKHIF
HIKTLHLGHAAKSFGLRDAPQNLNANLGKARHSKAKEQKKRPVKKMSNKERMAEILRSEY
SSGIESAAPNKQKQKMGLKMHRKPGQRKVRKQQA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagatgggttaatattgaacatcgctgacaaccctgtgcttcacaatgggagc
aagaggtttcaaaaatccttcagacttgctgataaatggaaagtcagaaaaactgcaaag
cgagctgcagagggaggaggcttggaaggccccccctcgaaacggaaaccagggtcccct
gcaaagagggtgccccaggctgcacagaaagcgacactagaaaaggtgacccctaaatcc
ctgccaaagatccatcccaagaagcaggtgaaagaggggggcagaactccagagaccgcc
ctgaagggcaagggaaccccgaaaagccgtctccagaccaatgcagccggccgggaggac
agagagggaggggaaagaccgttcatcaagacgtcgtctctcttcagaaacaacccagag
atccccgagatccacaggcctgcggtggcccagctgaaggagaaagtgttcacaagtgac
tcgttcagtgagctgaacctgcacccccacctgctctccactctgaacaatgtgttgaag
gtctccagcatgaccagcgtccagaagcagacaatcccggcactgcttgatgggcgggac
gctgtggttcgctcccagaccggctcaggtaagaccctcgcttatggaatcccattggtg
caatccttacaggctgtgcagcccaagatccagcgcagcgatgggccgttggctgtcatt
gtggtccccaccagagagctggccctacagagctttaacatcatccagaaactattgaag
ccgttcacttggattgtacctggagtgctgatgggtggggagaagcgcaaatcagagaag
gccaggttgcgaaaggggatcaacatcctgatcacaaccccgggccgcctggtcgaccac
atcaacaacaccaagagcttcagcttcagccgcatcaggtggctcgtcctggacgaggct
gacaggatcctggacctggggtttgaaaaggacgttgcagtgatactgaacgctctcaat
gctgcgcaggagcagagacggaacgtgctgctgtctgccacgatgacagacggtgtgagc
aaactggcaggtatctgtatgaaggagccagtcagcatccaggtggccgaggcacctgcg
gagccacggggaggcggggagggcgcactcggggccccctccggaggtctctctgagagt
tttgccgtcccggagaagctgcgccagcacaccgtggtcgtccccagcaaactgcgcctc
gtcacgctggcagctttcctcctggggaagtgcaagcatgagaagagccagaaagttatt
gtgtttctctccagctgcgagtctgtggaatttctctttgccatcttcaaggaggttctg
tgtaacaatgcagggaaccaggagaccagggaggtgtccccccagcgccctctgctggac
ttcatgagactgcatggcaacatggagcaggaggagaggacggaggtgtttcagaagttt
tcccaggtgaagtctggcatccttctctgcacggatgtggcagcgcgtgggctggacctg
ccccttgtcacctggattgttcagtacacagccccggcctcgcccgcagagtatgtgcat
cgcgtgggtcggaccgcgcggatcggcacacaggggagcagcctgctgttcctgaccccc
acagagacagactacctgggggtgctgggctctcacaacatcagcatgtcggagatgaag
gtggaagatattttagcaagcctcatgttggaagactgggttaaaggacgtggacaatgg
ggtaacaagaaatcccatggggccgtgcaacaagaagtgcgagagcgggccacagtgttg
cagacggagtttgagaattttgtccattcctgcgaggagaacgtccaggcagccaagaaa
gccctgcagtcgttcgtgagaggctacgccacgtacccagccagcctgaagcacatcttc
cacatcaagaccctccacctgggccacgcggccaagagcttcgggctgagagatgctccg
cagaacctgaacgccaacctgggcaaggccaggcacagcaaagccaaggagcagaagaag
aggcctgtcaagaagatgagcaacaaggagagaatggctgagatccttcgctctgaatat
tccagtgggatcgagtccgctgctcccaacaagcagaagcagaagatgggcttgaagatg
cacagaaagccaggccaacgcaaagtcaggaagcagcaggcataa
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