Polyodon spathula (Mississippi paddlefish): 121309747
Help
Entry
121309747 CDS
T07273
Symbol
rapgef1a
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04510
Focal adhesion
pspa04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121309747 (rapgef1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
121309747 (rapgef1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
121309747
NCBI-ProteinID:
XP_041098827
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MGNTNQKTRPPDAGVKKDLPSKLEPISDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKQ
QQPEPTVKAAEKPVNKNVSRLEEHEKDVVSALRYFKTIVDKMVADRRVLEMLPGSASKVL
EAILPLVQVEPRIQHRVTDGRAEHIKPFSSAVSSCHNRVYQSLANLIRWSDQVMLEGVNL
DDKETVHAVTAVIKAVLDGVKELVKLTIEKQEHPSPASPASPVKISPPCKSEITTELPLT
EREKEILHKTTPMTRSLEILTDAAEEDVAPPKPPLPGIKVNEHSPPALPPKKRQSAPSPT
RVAVVAPMSRTTSGSSLPIVISKQEYDQDCLQRRLSGGSRSYGGESPRLSPCNSIGKLSK
SDEQLSSLQHDSGQCSRNTSCETLDNTENNDPDYDFLHQDLSNAEQGPHVVPSGVLSPLP
ESHSESPSSFPGQPFEYCHSLGPGASPQPASIETPPALPQKKRRSAPSLQSEGLGSRVSY
ERHPSQYDNISEDDQTVPPFPVFSAVSPVPQGIATIFPADFNASVTDDIPVSPPPLPEKK
SKHIQQYMQFLEDYSEPQPYLFYPTPQSEIIYEQRNKRFQEAYCFNDSFSSTDSVHELLP
PPRLPPKQRQLASYTASSSSSSSSSSLSCHVQHAKAAVPVEDANAALSLSMSVSNSFLSR
HSSFTAPSYKSVYRSYSQDFAPHNQAFIPPFLSPVSSHFTTVHQSQSLDLASPATAVPGG
VANGSQDGSSGSLAVCPPPLPDSLQTSVSESANEEGGEGEYVNLYSSSQVNGELPHSKGD
PAAVADDALSGPSPQKPSTNSKENAEDGSRRQKSTDSDHSEEEVDELSLIEHKEIMSRIT
LKQEVRDRVCASDQDLSAIIEHVEPSLRSDDGPDVRAGSGDILLVHATETDRKDLVLYCE
AFLTTYRTFITPEELIKKLHYRYTRFCHSPETYKKRLSKNTFFVLVRVVDELCLVELTDD
ILKQLMDLVFRLVCSGELSLARVLRKNILDKVDQKKQLRYINSMKPLAARGVAARPGTLH
DFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSII
ILQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEY
CTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDGKVNFSKRWQQFN
ILDSMRRFQQVHYELKRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRKTEREEKT
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggggaatacaaatcagaagacacgacctccagatgcaggggtgaaaaaggatttgccc
agtaagctagagcctatatcagattcccagcgctcccacctctcctcgttcaccatgaag
ctgatggacaagtttcactctcccaaaatcaaacggacgccatcgaaaaaggggaagcag
cagcagccagagccaacagtgaaagcagctgagaaaccagtgaacaagaatgtgagtcgc
ttggaggagcacgagaaggatgtggtgagcgccctgcggtatttcaagaccatcgtggac
aagatggtggccgacaggagggttctggagatgctgccgggctctgctagcaaagtgctg
gaagccattctcccgctggttcaggtggagccgcgcatccagcacagggtgactgacggg
agagctgaacatataaaacccttcagctctgcggtctcatcgtgtcacaatcgggtctac
cagagcctggccaatctgattcgctggtctgatcaggtgatgctagagggtgtgaacctg
gatgacaaggaaacggtacatgccgttaccgcggtgataaaggcagtgctggatggagtg
aaggagcttgtgaaactgacgatcgagaaacaggagcacccgtccccagcctccccagca
tccccagtcaagatttcaccaccctgcaaatccgagatcactacagagcttcctttgacg
gagagggaaaaggagattctgcacaaaaccacgcccatgacgcggtcgctggagatcctg
acagacgccgctgaggaggatgtggctccacccaaaccacccctgcctgggattaaagtc
aatgagcacagccctccagctttgccacccaaaaagagacagtcagccccctcacctact
cgtgtagcggttgttgcaccaatgagcaggacaaccagtggttctagtttacccattgtt
atcagcaagcaggagtacgaccaggactgtctccagcgacggctctctggtggcagtcgc
tcttacggaggcgagtctccgcgcctctccccctgcaacagcattgggaagctgagcaag
tctgacgagcagctctcctccctgcaacacgacagcgggcagtgctcccgcaacaccagc
tgcgagacgctcgataacactgaaaacaacgacccagattacgatttcctgcatcaggac
ctctcgaacgctgagcaggggcctcacgtggtccccagcggagtgctgagccccctgcct
gagtctcacagcgagtccccatcctccttcccagggcagccctttgagtactgccactcc
ctaggaccgggggcttcaccgcagccagcctccatagagacccccccagccttgccccag
aagaaacggcgcagcgcgccctccttgcagtccgagggcttaggttcgagggtctcctac
gagcgccacccctcgcagtacgacaacatctccgaggacgaccagacagtgccccccttc
cctgtgttttcagccgtctctccggtcccccagggcatcgccaccatcttccctgctgac
ttcaacgcctcggtgacggatgacattcccgtgagcccccctcccctcccggagaagaag
agcaagcacatccagcagtacatgcagtttctggaggattactcggagccacagccctac
ttgttctatccgacaccgcagagcgagatcatctacgagcagcggaacaagcgcttccag
gaggcgtactgcttcaacgactccttcagcagcacagactctgtgcatgagctgcttccc
ccgcccagactaccgcccaagcagaggcagctggcctcctatactgcctcctcctcctcc
tcctcctcctcctcttctctctcatgtcatgttcagcatgctaaagctgcagtcccagtg
gaggatgccaacgcggctctcagtctgagcatgtccgtctctaactccttcctgagccgg
cacagctccttcacagcgccttcgtacaagtctgtttacaggtcctactctcaggacttt
gctcctcacaatcaagccttcatccctcctttcctctcacctgtctcttcccactttaca
actgtccaccaatcgcagagcttggacctagcttcgccagccactgctgttcctgggggc
gtggccaatggttcccaggacggctctagtggctctcttgctgtctgtcctcctcctctc
cctgactctctgcagacctctgtgagcgagagtgctaacgaggaaggcggggagggtgaa
tacgtcaatctgtattcgtccagtcaagtcaatggagagctcccgcactccaaaggagac
ccagcagcagtggcagacgatgcactgtcaggcccttcccctcagaagccctcgaccaac
agcaaagagaacgcagaggatggcagcaggagacagaagtcgacagactcggatcacagt
gaggaggaggtggacgagctctccctgatcgagcacaaggagatcatgtcgaggataacg
ctcaaacaggaggtgagagaccgggtctgtgcatctgatcaagacctgtctgctatcatt
gaacatgtggagccatctttgaggagtgacgacgggcctgatgtgcgtgctggatcaggg
gatattttactggtgcacgcaaccgaaacggaccgcaaagatctggttttgtactgcgag
gcttttcttacgacttaccgaacgtttataacaccagaggagctgatcaagaaactccac
tatagatatacgagattctgccacagtccagaaacgtacaagaagcgcttgagcaagaac
accttcttcgtgcttgtccgtgtggtggatgaactctgtttggtggagctcactgatgac
attctgaagcagctgatggacctcgtgttccggctggtctgcagcggggagctgagtctg
gcacgagtcctgaggaagaacatcctggacaaggtggatcagaagaagcagctgcgctac
atcaactccatgaaacccctggctgcacgcggtgtggctgcaagacccggcaccctccat
gatttccgcagtcatgagatagcagaccagctgaccctgttagacgctgagctcttctat
aaaatagagatccctgaggttttattgtgggctaaagaacagaatgaggagaaaagccct
aacctgacccagttcacagagcacttcaacaacatgtcttactgggttcgatcaataatc
attcttcaagagaaagcccaggacagagagaaactgctcctcaagttcattaaaattatg
aagcacttaagaaagctgaataattttaactcctacttggcaatattatcagctctggac
tctgcaccgatacggagacttgagtggcagaaacagacctccgagggtctggaggagtat
tgcaccttgattgacagctcatcctcgtttcgggcatatcgggcagcgctggcagaggtg
gagcccccctgtataccttacctggggctcatcctgcaggacctgacgttcgtccacttg
gggaaccctgacttaatcgatgggaaggtgaacttctccaagcgctggcagcagtttaac
atcctggacagcatgaggcgctttcagcaagtgcattacgagctgaaacgcaacgatgac
attgtctccttcttcaatgactttagcgatcacctagcagaggaggcgctctgggaactg
tccttaaaaatcaagccgcggaatatcacgcgacgcaaaacagagcgggaggagaagacc
tag
DBGET
integrated database retrieval system
