Polyodon spathula (Mississippi paddlefish): 121309760
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Entry
121309760 CDS
T07273
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4 isoform X1
KO
K09453
snRNA-activating protein complex subunit 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121309760 (snapc4)
03021 Transcription machinery [BR:
pspa03021
]
121309760 (snapc4)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
121309760 (snapc4)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
121309760 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
121309760
NCBI-ProteinID:
XP_041098867
LinkDB
All DBs
Position
Unknown
AA seq
1535 aa
AA seq
DB search
MASGDLNAEREKIQWEIEELERNLGQAAAASVDVSFSESENDDSDLEQDESTNCGGQPPT
GMSAAELSAEREKIQREIEELERSLGPAAACMDVSPLGSQEEDSEEDEEADGRLVVDTGG
ADGEEEDLGLPEDTETCLQINLVYQEVIEEKLQELEMLLAENREQQNEILSQVSASQADR
TDGTKLPPSNLFLGHFLKPYFKDKTTGLGPPPNPDTKEKMAQGIKSFEDLGVRKWKAWEK
ALLRSSVVSDSLRRLLQPKLSRVEYLTQKMEKASGMEKQILEKQIDEAEKEIEDISRMPD
EELIGGREQEHDWEKIANIDFEGLCKPEELRKYWQNHLHMDINKKKWSDEELERLKEIAA
NHNHTNWDKIAEELGTNRRPFMCLQMYQLFINTELRKRCFTKEEDKVLMELVEKMRIGSH
IPYTKISYFMEGREAAQLIHRYTHSCDPALKRGSWSSEEDALLIKAVAKFGPREWWKIRN
EVPGRTDAQCRDRYMNCLSEDVKKGKWSSEEETLFIDLVNKHGVGRWAKIASEIGNRTDS
QCLHKWNTLTKPKRRRWKVKEVRASRLGTMKSKTSKMKRKASLVGKGKLSSSDSEEMELS
DSVEELSGSEGDDETEEEEEEEKEEYCMPSIDLWIPVGPKIPEGTRSKRPARKTAAPPSP
EAQPQSGTAHGRRNRAPSRSTAVSSEGSAVLKGPGYLANRNLNTSSAAELAAMISQTGNK
ILKFSFTEVRKLLRPKCTLQEKTGTKKGVVKQKTTRTFVSNLQSKNLNQKLMMAVTPWMG
NLLMPLNNGRCKRTEADVIRERAEKIGLATTPVFTLLITMFQIDAEGCRKVIEERAKRIK
AEGCQVIQERTRRGTPSYYNSVKNNRRPLISPTASCVRTVAQILYEKRLKEARMRQRDSP
RTSILLMPSMVVPQTVVIQQPLTQVTPEQHSPSPVIPTGVTAEKPNACGGEVTGKTAGDK
HGKKPPRKRQRTSKTKPPEGDSSTPSTNPIQIPASNTVSSNPIQIPASNTVSSNPIQIPA
SNTVFSNPIQIPVSNTVSSNPIQIPASNTVSSNPIQIPASNTVSSNPIQIPGATPSPMTI
SWMLTPQGLVPVASQAPIAMQAQNAPQSAVVVHLNQQGTLQSSATDTPKRYIASTTTSPA
LPKPSGATVNPAIDIAAHGSITNVVTAAGQVLNPVSLVSTPSSSPLPTSSAVGTATVQTS
GTILSSPGQIQINRSAVAGLVQPNALQARPLLSNLQGFRLVRVVWPADQGTVSNLPVRTG
FPVNQVQQVSTAQSAQIPVRVVHQPHPSGLPPSHTPAASNSSCHPPGPPSTSTAKADKVS
VDLNLMFQEDEDLVKEWLRGKGGVSLPKLNVAVPYLPPSVFNLTTLLRLLEQKKSLEEKA
SILISGAGREDGRSETQVDAIRSLVAEKLENNPAYLLLKARFLACFTLPAFLATVPPVSV
TTTAPKFQDDPDFKKKFRKSQDKQGAGPAKSPRPKGPMEGCLETAPSNIKEKSAGESSAL
LGTEGAAATEFIGMRTRRSTRLKKKNVEKEDGLQG
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggagatctgaatgcggaaagggagaagatccagtgggagatcgaggagctg
gagagaaatctgggtcaggctgctgctgcttctgttgacgtttccttttctgaatcagaa
aatgatgattcagatttggagcaagatgaaagtacaaattgtggtggacagcctccgact
ggtatgtccgctgcggagctgtctgcagagagggagaagatccagagagaaatcgaggag
ctggagcgcagtctgggtcctgcagctgcctgtatggatgtgtcccctcttggatcacag
gaagaggattcggaggaagatgaagaggctgatggccgtcttgtggtggacacggggggt
gcagacggagaggaagaagaccttgggcttcctgaagacactgagacctgtctgcagatc
aacctggtgtaccaggaggtgatcgaggagaagctgcaggagctcgagatgctgctggct
gagaacagagagcaacagaatgaaatcctctcccaggtgtctgcttcacaggctgacagg
acggatggaaccaagctaccaccatccaacctgtttttagggcacttcttgaaaccatat
tttaaggataagacaactggccttggtccacctcctaatccagatacaaaggagaagatg
gctcaaggaattaagtcctttgaagatcttggggtgagaaaatggaaagcctgggaaaag
gccttgctccgttcatcggtggtaagcgacagcttgagacgtttgctccagccaaaatta
tcaagagttgaatacttgacccagaaaatggaaaaggccagtggaatggagaaacagatc
cttgaaaagcagatcgatgaagcagagaaggaaattgaagacatcagccggatgcctgat
gaagagttgattgggggccgcgaacaagagcatgactgggaaaagattgcaaatattgat
tttgaaggcttgtgcaaaccagaggagctgaggaagtactggcagaaccacctgcacatg
gacatcaacaagaagaagtggagtgatgaggagcttgagcggctgaaggagatcgcagcc
aatcacaaccacaccaactgggataagattgcggaggagctggggacaaaccggagaccc
ttcatgtgcctgcagatgtaccagttgttcattaacacagagctgagaaagaggtgcttt
accaaggaagaggataaggtgctgatggagctggtggaaaaaatgagaatcggctctcac
atcccgtacaccaaaatttcctatttcatggagggaagagaagcggcgcagctcatccat
cgctatacgcatagttgcgatccggctctgaagagggggtcgtggtcaagtgaggaagat
gcgttgttaataaaagcagttgctaagtttggccctcgggagtggtggaaaattcgaaat
gaggtcccaggaagaaccgatgcacagtgcagagacaggtatatgaactgcctgagtgaa
gatgttaagaaagggaaatggagctcagaagaggagactttgttcattgacctggttaat
aagcatggagttggccgctgggcaaaaatagcctcagagattggaaacaggacagactca
cagtgtctacataaatggaacaccctgacaaaaccaaaaaggagaagatggaaagtaaag
gaagtcagagcgtcgagattggggacaatgaaaagtaagaccagtaagatgaagaggaaa
gcgtctctggtggggaagggcaagctatcgagctctgactccgaggagatggagctgtca
gacagcgttgaggagttgtcgggcagtgagggcgatgatgagacagaggaggaagaggag
gaggagaaggaggagtactgcatgcccagtattgacctgtggatccctgttggccctaag
attcctgagggcaccaggtctaaacggcctgctagaaagacagcagcgccccccagcccc
gaagctcaaccccagagcggaacagcgcacggcaggaggaacagagctccatcccgtagc
accgctgtctcttctgaaggcagtgccgtgctcaagggcccgggatacctggctaaccgc
aacctgaacaccagcagcgctgctgaactggctgccatgatttcccaaacaggaaacaaa
atattgaagttttcctttacagaagtgaggaagctactgagacctaaatgtacactccag
gagaagacggggacaaagaaaggtgtggtgaaacagaaaaccaccagaacttttgtctcc
aacctgcaaagcaaaaacctgaaccaaaagctcatgatggcagtaactccctggatgggg
aaccttttaatgcccttaaacaatggcaggtgtaagcgcactgaagctgatgtcattaga
gagagagctgagaaaattggtcttgccaccacgccagtgtttactctgcttattacaatg
tttcagattgacgcagaaggctgtcggaaggtcatcgaggagagagcgaaaaggataaag
gcagaaggctgccaggtcattcaggagagaactagaaggggaacccccagttattataac
tcagtcaagaataacagaaggccactgatatctcccacggccagttgtgtgagaacggtg
gctcagatcttgtatgaaaaacgtctcaaggaagccaggatgaggcagagagactctcct
cgtactagcatccttctcatgcccagtatggtcgtgcctcagacagttgttatccagcag
cctttgacacaggtcactcctgagcaacacagtccttctccagtcattcccactggggtc
acagctgaaaagcccaatgcctgtggaggagaggtgacaggaaagactgcaggcgataaa
catggaaaaaaaccaccaagaaagagacagagaacaagcaagaccaaacctccagagggt
gactcgagcaccccttccacaaaccccatccagattcctgcctcaaatactgtttcttca
aaccccatccagattcctgcctcaaatactgtttcttcaaaccccatccagattcctgcc
tcaaatactgttttttcaaaccccatccagattcctgtctcaaatactgtttcttcaaac
cccatccagattcctgcctcaaatactgtttcttcaaaccccatccagattcctgcctca
aatactgtttcttcaaaccccatccagattcctggagctacgccttctcctatgaccatc
agctggatgttgaccccacaaggtctagttcctgtcgcttcccaagccccgatagcaatg
caggcccagaatgcaccccagtccgcagttgtggtgcatctgaaccagcagggtactctg
caaagctcggctactgacactccaaagagatatattgccagcaccacaacaagcccagcg
ctgcctaaaccttccggagccacagttaatccagccatagacattgctgcccatggaagc
atcaccaacgtagtcactgctgctgggcaggtactaaatcctgtctctctggtttccact
ccctcaagttcccctttaccgaccagttctgcagtgggcactgccacagtgcagacttct
ggcacaatcctgtctagtcctggacaaattcagatcaataggtctgcagtagcaggcctt
gttcagccaaacgctcttcaagcgagacctcttttgtctaatctgcaagggttcagattg
gtcagggtggtgtggcccgctgaccagggaactgtcagcaatcttccagtaagaactggg
ttccctgtcaaccaagtccagcaggtatctacagcccagtcagcacaaatacctgtgagg
gtggttcatcagccacatccgtcaggtttgccaccttcccatactccagctgcatccaac
tcatcttgccaccccccaggtcctccgagtacttccaccgccaaggctgataaagtcagt
gtggacctgaacctgatgttccaggaagatgaggatttggtgaaagaatggctcaggggg
aaaggaggtgtcagtctacctaagctgaatgtggcggttccctatctgcctccttcggtc
ttcaacttgacaacgctattgcgactccttgagcagaaaaaatctttggaggaaaaggcc
tcgattctcatctctggggcaggacgtgaagatggcaggtcggagacccaggtggatgct
attagaagtttagtagcagaaaagctggagaacaacccggcttaccttctgcttaaagca
aggttcctggcgtgtttcactcttccagcatttctagcaaccgtccctcctgtgagtgtc
acaactactgccccaaagttccaggacgaccctgactttaagaagaagtttaggaaaagc
caagacaaacagggtgcaggtccagctaaaagtcctagaccaaagggacccatggaaggc
tgtttagaaactgctccatccaacataaaggagaaaagcgctggagaaagttccgctctc
ctggggactgaaggagcggcggccactgaattcatcgggatgaggacaagaagaagtacc
cgcttaaaaaaaaagaatgtagaaaaagaagatggtttacaaggttga
DBGET
integrated database retrieval system
