Polyodon spathula (Mississippi paddlefish): 121309765
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Entry
121309765 CDS
T07273
Name
(RefSeq) retinoic acid receptor RXR-alpha-A isoform X1
KO
K08524
retinoid X receptor alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03320
PPAR signaling pathway
pspa04148
Efferocytosis
pspa04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121309765
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121309765
03320 PPAR signaling pathway
121309765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121309765
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pspa03310
]
121309765
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
121309765
Nuclear receptors [BR:
pspa03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
121309765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
121309765
NCBI-ProteinID:
XP_041098876
LinkDB
All DBs
Position
Unknown
AA seq
261 aa
AA seq
DB search
MNPVSSSEDIKPPLGLNGVMKVPAHPSMSPLSLTKHICAICGDRSSGKHYGVYSCEGCKG
FFKRTVRKDLTYTCRDSKDCMIDKRQRNRCQYCRYQKCLAMGMKREVLLNAAVQEERQRG
KDRNENEVESTSSANEDMPVEKILEAELAVEPKTETYIETNLGIPSNSPNDPVTNICQAA
DKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSITVKDGILLATGLHV
HRNSAHSAGVGAIFDRYCCTP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgtcagcagctcggaagatattaaacctccgcttggattgaatggggtgatg
aaagtaccagcccatccttcaatgtccccgctgtctctcaccaaacacatctgtgccatc
tgcggggacaggtcctcaggtaaacattatggagtctacagctgcgaaggatgcaagggc
ttcttcaagaggacggtgaggaaggacctgacctacacctgcagagacagcaaggactgc
atgatcgacaagcgacagcgcaaccggtgccagtactgccgctaccagaagtgtctcgcc
atgggcatgaagagagaagttttgttaaatgcagccgtccaagaggagagacagaggggg
aaagaccgaaatgagaacgaggtggagtcgacgagcagcgccaacgaggacatgcctgtg
gagaaaatcctggaggctgaactcgctgtggagccaaagacagagacatacattgagaca
aatctggggataccctcaaactcgccaaacgatcccgtcaccaacatatgccaagcggca
gacaagcagctcttcacgcttgtggaatgggcaaagagaatcccacacttctcagagctg
cccctcgatgaccaggtcatccttctaagagccgggtggaatgagcttctcattgcctca
ttctcacaccgctcgataacggtaaaggacgggattctcctggctaccgggctgcacgtt
catcgcaatagtgcacatagtgccggagtgggagccatttttgacaggtactgttgcact
ccgtga
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integrated database retrieval system
