Polyodon spathula (Mississippi paddlefish): 121309791
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Entry
121309791 CDS
T07273
Name
(RefSeq) glycine--tRNA ligase-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121309791
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspa01007
]
121309791
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121309791
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121309791
Enzymes [BR:
pspa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
121309791
Amino acid related enzymes [BR:
pspa01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
121309791
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121309791
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
121309791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
Motif
Other DBs
NCBI-GeneID:
121309791
NCBI-ProteinID:
XP_041098901
LinkDB
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Position
3:complement(472934..497601)
Genome browser
AA seq
750 aa
AA seq
DB search
MRLRAAPALLRICVQTASSKPLAFHPSAGVGSRRAPLKGRLFSVSARSLKGNKRQSLWQQ
FAEGRNMDGNVEEALAPLRKAVKEQGDLVRQLKEEEAPAVDVSKAVAELKARKRVLEAKE
LALQPQDDIVDRPKLEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNIIQIWRQHF
IQEEQILEIDCTMLTPEAVLKTSGHVDKFADFMVKDVKNGECFRADHLLKAHLQKLMSDK
KCTAEKRAEMDSVVTQLDNYSQQELAELFVKYNVRSPVTGNDVSPPISFNLMFQTCIGPG
GNMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMA
EIEHFVDPNDKSHPKFQSLTDLELTLYSSKAQTSGQSAHKMKLGDAVEQGVINNSVLGYF
IGRIYLYLVKVGVSPDKLRFRQHMDNEMAHYACDCWDAETKTSYGWIEIVGCADRSCYDL
TCHARATKVPLVAEKPLKEAKTVNVVQFDTNKGAIGKAYKKDAKLVMEYLAICDECYITE
QERLLNENGEFTIETEGKTFILTQDMVSVKRFQKILHVEEIVPNVIEPSFGIGRIMYSIF
EHTFHVREGDEQRTYFSFPATVAPYKCSVLPLSQNHEFVPFVRELSEALTRNGVSHKVDD
SSGSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDCMRQIRAEVSDLPSIVRDL
ANGVTTWAEVETKYPIFEGQETGRKETTEE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcagagctgcacccgccctgctcagaatctgcgtgcagactgcaagctccaaa
ccgcttgctttccacccatcggccggtgttgggtcacgtcgagcccctctcaaaggcagg
ctcttctccgtgtcagcgcgttccctgaaaggcaacaagagacagagtctttggcagcag
tttgcagaagggaggaacatggatggtaatgttgaagaggcgctggctcctctgaggaag
gcagtgaaggagcagggcgacttggtgaggcagctgaaagaagaggaagccccagctgta
gatgtcagtaaagctgtggcagagctgaaggctcgcaagcgggttctggaggcgaaggag
ctggctctgcagccgcaggatgacatcgtcgacagacctaaactggaggacaccctgaag
aggaggttcttctacgatcaggcctttgccatctatgggggtgtcagtggactgtatgat
ttcggccctgttggctgtgccctgaagaacaacatcattcagatctggcggcaacacttc
attcaggaggagcagatccttgaaatcgactgcaccatgttaaccccagaggcagtcctc
aagacctctggtcatgtggacaagtttgctgatttcatggtgaaggatgtaaagaatgga
gaatgtttccgtgcagaccacctcttaaaagctcatcttcagaagttaatgtcagataag
aagtgtacagcagagaagagggcagagatggacagtgttgtcactcagttggacaactac
agccagcaggagttagctgagctgtttgtgaagtacaatgtgagatctcctgtcactgga
aacgatgtgagccctcccatctcattcaacctcatgttccagacgtgcatcgggccagga
ggaaacatgccaggctatctgagacctgagactgctcagggaatctttctgaatttcaag
cgcttgctggagttcaaccagggcaagttgcccttcgctgctgcgcagattgggaactcc
ttcaggaacgagatctctccacgctccggcctcatcagagtcagagagttcaccatggca
gaaatcgagcactttgtggatcccaatgataaaagtcaccccaagttccagagcctgacg
gacctggagctcacactgtactcctccaaggctcagaccagcggccagtctgcacacaag
atgaagctgggagatgcagttgagcagggtgtgatcaacaactcagtcctgggatatttc
attgggaggatctacctatacttggtgaaagtaggggtctctccagacaagctgcgattc
cgtcagcacatggacaatgagatggcccactacgcctgtgactgctgggatgccgagacc
aagacgtcttacggctggattgagatcgtgggctgtgctgaccgctcctgctatgacctg
acctgccatgctcgagccaccaaggtgccgctagtggctgagaaacccctaaaggaagcc
aagacagttaatgttgttcagttcgacaccaacaagggagcaatcggaaaagcttacaag
aaggacgccaagctggtgatggaatatctagccatctgtgatgagtgttacatcacagag
caggagagactcctgaatgagaatggagagttcaccatcgagaccgaagggaagaccttt
atattgacccaggacatggtcagtgtgaagagatttcagaagatcctgcacgtggaggaa
attgtccccaacgtgattgagccgtccttcggtattggaagaatcatgtactccatcttc
gaacacacattccatgtccgtgaaggagatgagcagagaacatacttcagctttcctgcc
actgtagccccatacaagtgctccgtcctgcctctgagtcagaatcacgaattcgtgcct
tttgtccgtgagctgtctgaagccctgaccagaaacggagtctctcacaaggtggacgat
tcttccggctccattgggaggcgttacgccaggactgacgagatcggcgtggcgttcggc
atcaccatcgatttcgacacggttaacaagacccctcacacagccactctgagagaccgg
gactgcatgcggcagatcagggcggaggtatctgatcttccctccattgtgcgtgaccta
gcgaacggagtcactacctgggctgaagtggaaaccaagtacccgatctttgaggggcag
gagactgggagaaaagagacgactgaggaataa
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