Polyodon spathula (Mississippi paddlefish): 121309850
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Entry
121309850 CDS
T07273
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
pspa03015
mRNA surveillance pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121309850 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
121309850 (rbm8a)
03015 mRNA surveillance pathway
121309850 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121309850 (rbm8a)
03041 Spliceosome [BR:
pspa03041
]
121309850 (rbm8a)
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
121309850 (rbm8a)
Spliceosome [BR:
pspa03041
]
Complex C
Other components
EJC/TREX
121309850 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
121309850
NCBI-ProteinID:
XP_041098932
LinkDB
All DBs
Position
Unknown
AA seq
173 aa
AA seq
DB search
MADVLDLHEEAGAEDFPMDEDETIHKLKEKAKRRKGRGFGSEEGARSRLREDYDTVEQDG
DEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNIHLNLDRRTGFLKGYALVEY
ETYKEAQAAMEGLNGQDMMGQPINVDWGFVRGPPKSKRRGGRRRSRSPERRRR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactggatttgcacgaagaggccggggccgaggatttccccatggatgaa
gatgaaaccattcacaagttaaaagagaaagcgaagcggaggaagggcagaggcttcggt
tcagaggagggtgcgaggtccagactgcgagaggattacgacactgtggagcaggacggg
gacgagccaggcccgcagagatctgtggagggctggattctgtttgtgactggagtccac
gaggaagccactgaagaggacatccacgacaaattcgcagagttcggagagatcaagaac
attcacctgaatctggacaggaggacaggattcctcaagggctatgcgctggtggagtac
gagacctacaaagaggcccaggctgccatggaggggctgaacggtcaggatatgatgggt
cagcccatcaatgtggactggggcttcgtaaggggaccgcccaagagcaagaggagaggc
ggacggagacgaagccggagtcctgagaggaggcggcgctaa
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integrated database retrieval system
