Polyodon spathula (Mississippi paddlefish): 121309897
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Entry
121309897 CDS
T07273
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121309897
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121309897
Membrane trafficking [BR:
pspa04131
]
Protein recycling
Others
Others
121309897
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
121309897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
USP7_C2
PDZ_2
SNX17_FERM_C
RBD
RA_3
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
121309897
NCBI-ProteinID:
XP_041099002
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MTAAGVVVKMADEVGDGTRSGQPPRISSGPAAAGPCTAASGPRLVRIVKSDSGYGFNVRG
QVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHKQVVE
LIRAGDRELLLTVLSVPQHEADSLDPGDEAGQVFHDYSEKQAVPISIPTYKHVEQGTEKF
VVYNVYMAGRQLCSKRYREFSILHQNIKKEFGSFTFPRLPGKWPFSLSEQQLDARRRGLE
EYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRVALPDKSTVTVRVKKNSTTDQV
YQAVASKVGMDSITASYFALFEVINHSFVRKLAPNEFPHKLYIQNYTSAVPGTCLTVNKW
LFTTEEEVLLNDNDLAIAYCFHQAVEDVKKGRIKAEEKAYQLQKLAEQKKMGMYLSMLRS
CEGYNEILFPHCACDSRRKGHVITAISVKHFKLHACTEEGQLENQVIAFEWDEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEVTDLDNQNCS
RDEYLPAVEIAQKGWRHLGGEIVTS
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggctggcgttgttgtgaagatggcggacgaagtgggagacgggacgcgctcc
ggacagccgccgaggatcagctccggccccgcggcagccggcccctgcaccgcggcctcg
ggtcccaggctggtccgaatcgtcaagtcggactccggctacgggtttaacgtccggggg
caggtgagcgagggaggccagctccggagcatcaacggggagctgtacgcgccgctgcag
cacgtcagcgccgtcctgccggggggagccgcggacagagccggcatctccaaaggggac
cgcatcctggaagtgaatggtgtgaatgtggagggtgcgactcacaagcaggtggtggag
ctgatccgggctggagatcgggagctgctcctcactgtgctgtcggtgccgcagcacgag
gccgacagcctggacccaggggacgaggccggccaggtcttccacgactacagcgagaag
caggccgtgcccatctccatccccacctataagcacgtggagcagggcactgagaagttt
gtggtgtacaacgtgtacatggcgggcaggcagctctgctccaagcgctaccgtgagttt
tccatcctgcaccagaacatcaagaaggagttcggcagcttcaccttccccaggctgccc
gggaagtggcccttcagcctatccgagcagcagctggacgccaggcgcaggggcctggag
gagtacctggagaaagtctgttccgtgcgggtgatcggggagagtgacatcatgcaggag
ttcctgtccgagtctgacgagaattacaatggcgtttcggacgtggagctgagggtagcc
ctgccggacaagtcaaccgtgacggtgcgagtgaagaagaacagcaccactgaccaggtg
taccaggctgtagcctccaaggttggcatggacagtatcacagcgagctactttgccctg
tttgaggtgatcaaccattcgttcgtgaggaagctggctcccaatgagttccctcacaag
ctgtacatacagaactacacctctgccgtgcccgggacctgcctcactgtcaacaagtgg
ctcttcaccacagaggaggaggtgctgctcaacgacaacgacctggccatcgcctactgc
tttcaccaggcggtggaggatgtgaagaagggtcgcatcaaggctgaggagaaagcctac
cagcttcagaaactggctgagcaaaagaagatgggaatgtatctgagcatgctgcgctcg
tgcgagggctacaacgagatcctcttcccgcactgcgcctgcgactcgcggcggaagggt
cacgtgatcacggccatcagcgtcaagcacttcaagctgcacgcctgcaccgaggagggg
cagctggagaaccaggtgattgcgttcgagtgggatgagatgcagcggtgggacactgac
gaggagggcatggcgttctgcttcgagtacgcccgtggagagaagaaaccacgctgggtc
aagatcttcaccccatacttcaactacatgcacgagtgcttcgagagggtgttctgtgaa
ctcaagtggaggaaggaggtggaagaggaggtgactgatctggacaatcagaactgcagt
agagatgaatatcttcctgctgttgaaatcgcacagaaggggtggagacatctaggagga
gagattgtgacctcgtaa
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