Polyodon spathula (Mississippi paddlefish): 121309964
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Entry
121309964 CDS
T07273
Symbol
si:ch211-57n23.4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 3
KO
K22654
immunoglobulin superfamily DCC subclass member 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121309964 (si:ch211-57n23.4)
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
PUNC
121309964 (si:ch211-57n23.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Adeno_E3_CR2
Pur_ac_phosph_N
Ig_C17orf99
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
121309964
NCBI-ProteinID:
XP_041099096
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MTPFSCGVVGQEGMFTPAVCIALQMSWVGGLAGSPELAFLVEPSDVIAVRDRPLMLDCQV
EGEGPISVTWRKNGVAMVTGQRASILVNGSLLIQSFHKRRDGNETDAGEYECAVQNRYGM
LLSRRARVQLASLPKFHTHPQSMLVEEGGVARFQCQVQGVPEAVISWEQNRTALQTNDLR
YTLLPAGILQITGVRRSDSALYRCVATNIANTRYSHEGQLNVSVTVPKTYKEPFILSGPQ
NLTLTVHQTAILECIATGNPRPIVSWSRQDGRSIGVEGIQVLGTGNLMISDVSLQHSGVY
VCAANRPGTRMRRTALGRLVVQAPPEFLQWPQSSSRPAGSSAVFSCVAQGVPEPHLIWLK
NGKILTPGENVKLTSNNSTLAITRITSEDEAIYQCIAENGAGTNQASARLAVSLSRELPD
SPEKLSASPLSSTSIQVTWAQPPTEVTDGIIGYVLHIRKIGEPDSQELQEAVSKTTFQHL
FSNLEASTTYSIYLKAYSPLGASKRSLSVVTTTLGDVPATCGFFTKVLNSSAVQAFWELP
HKPGRVQGFKLYHRRLPQPDFQGPQLLPSTSNAFVFTQLEPMAVYEIKLLAYNGNGDGNG
TVRIVSMREEDSSDKTRTGSEAGCNCRQDSEGSMTGIVVGIHIGMACIIFCVLFLMFGYR
RSLFCRKGTQDSWAVPQGTEAAQGTQLNVGHKKGVGQPAEAIELVTQNQSSAQTQRPSQC
EVLIEQHQPGQPG
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacccccttcagttgcggggtcgtaggacaggaggggatgttcacgcctgctgtctgt
atcgccctgcagatgagctgggtgggaggattggctggcagccctgagctggcgttcctg
gtggagcccagtgatgtcatcgcagtgagggaccgccccctcatgctggactgccaggtg
gagggggaggggcctatctcagtgacctggcggaagaacggggttgcaatggtgacgggg
cagagagccagcatcctggtcaatggctctctgctgatccagagcttccacaagcggcgc
gacggcaacgagacggacgcgggagagtatgaatgcgccgtgcagaaccgctatggcatg
ctgctgagcaggagggcacgcgtgcagctggcatctctccccaagttccacactcacccc
cagtcgatgctggtggaggagggaggcgtggctcggtttcagtgccaggtccagggggtc
ccagaggctgtgatcagctgggagcagaaccgcacagctctgcagaccaacgacctgagg
tacaccctgctccccgccggcattcttcaaatcactggagtgcgccgctcagactctgcc
ctctaccgttgcgtggcgaccaacattgcaaacacgcgctacagccacgaggggcagctc
aacgtgtctgttacggttccgaagacctacaaagagccattcatcctctccggtcctcag
aacctgactctcaccgttcaccagaccgccatcttggagtgcatcgccacgggcaaccct
cgaccaatcgtctcctggagccggcaggatgggcgctccatcggcgtggaagggatccag
gttcttgggacggggaacctgatgatttcggacgtgtcgctccagcactcgggggtgtac
gtgtgtgcagcgaaccggcccgggaccagaatgagacggactgcgctggggaggctcgtg
gttcaggccccgcctgagttcctgcaatggccgcagtcctcctccaggccagcagggagc
agtgcagtgttcagctgtgtggcgcagggggttcccgagccccatctcatctggctaaag
aatggcaagatcctgactccaggagaaaacgtcaagctcaccagcaataacagcactctg
gccatcactcgcatcacctcggaggacgaggcgatctaccagtgcattgcagagaatgga
gccggcaccaaccaggccagcgcccggctggcagtgtccctgtccagggagctgccggac
tccccggagaagctgtccgcctcccccctctccagcacctcaatccaggtgacctgggca
cagccccccacggaggtgaccgacggcatcatcggatacgtcctgcacatccgcaagatc
ggggagccggacagtcaggagctgcaggaggccgtcagtaagaccacgttccagcatctc
ttcagtaacctggaggcctccaccacctactccatctacctgaaggcttactccccgctc
ggggccagcaagcggtccctcagcgttgtgacaaccaccttgggagatgttccagccacg
tgtggcttcttcactaaggtgctgaactccagcgctgtgcaggctttctgggagctgcct
cacaagccaggccgcgtgcagggcttcaagctgtaccaccgcaggctgcctcagccggac
ttccaggggccacagctgctccccagcaccagcaatgccttcgtgttcacccagctcgag
cccatggctgtgtatgagatcaagctgttggcttacaatggaaacggggatggaaacggc
acggtccgcatcgtctcaatgagggaggaggacagcagtgacaagaccagaacgggcagc
gaggcgggatgtaactgcaggcaggacagcgagggctccatgacagggatcgtggtggga
atccatatcggcatggcctgcatcatcttctgtgtgctcttcctcatgtttgggtaccgg
aggagtctgttctgcaggaaggggacccaggacagctgggcagtgccgcaggggacagag
gcggctcaagggactcagctcaacgtcggacacaagaaaggagtcggccaaccagctgaa
gccattgagcttgtcacacagaaccagtcatcagcacagacacagcgtccttcacagtgt
gaggtcctgattgaacaacaccagcctggacagccaggctaa
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