Polyodon spathula (Mississippi paddlefish): 121310029
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Entry
121310029 CDS
T07273
Symbol
rtn3
Name
(RefSeq) reticulon-3 isoform X1
KO
K20723
reticulon-3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121310029 (rtn3)
03036 Chromosome and associated proteins [BR:
pspa03036
]
121310029 (rtn3)
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
121310029 (rtn3)
Autophagy
ER-phagy
ER-phagy recepters
121310029 (rtn3)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121310029 (rtn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
Motif
Other DBs
NCBI-GeneID:
121310029
NCBI-ProteinID:
XP_041099166
LinkDB
All DBs
Position
Unknown
AA seq
1347 aa
AA seq
DB search
MADSTQPEKIPSSQGSDGFADASAGHNAPSPGKDVKPTPPAASIDSFLSSPQPVSLIQSP
QEGIKGLVSNKPSESVATSLRFLSQPGSFAPVVFDSHSQALGNRNLPEPPVELKEATKIE
EVRGVGTDSVIEAVSSESPRHVAPISGTGVTFHAFSNLGLSSSPDEVHGKTPDESPATKV
QELSQGVFSRGQTPEEPKVQGKPKADSETWGDGGFMLFKESHYERSPIKESTELFSPFNK
DPSPDQDSPDSPFEVLDDSQRKHSFGKEFLETVTSEWVPTQIAAAKVVPDVDQAKDEKDQ
GPFGPLADIHSIEVTTNLEKTIWGKEPAYKSMEKEAEEDSDESRDSTPEPDEEEKKISSV
SGRKTAPPPTPPPLPPRAKPIDAQVEEKQASPVKESSDEDLDFLPTAYIWEKPEKDAKKT
QKTLEKSCADFENLPPAYSEVETTTIAAAITSSSPPSYASFKFNTEELLKSQQPATAKVP
GPNWGVDSEPVENVDADSSGESDDTVIEDMSVVTEREPAVPKSTATVKDPEEMEQKVASA
KLEKPLLVPIINVIETEEQIISDDESDEKASEVVVEPADRAGKGSSTPVAGTTPQDSKPA
DAVVGKEDSQPTSAESKTEKPKQDSEPVLADSEIKSPTQDSECIFTDSIMEKLTQDPKPV
QADPKIETPSSVLADFAEDKSAQDQKPILFDSETKKSTQESQTSLDSVMEKPTQDPQPVL
FDSETKISSQDTKTIFTDSVMEKPTQDPQPALFDSETKISSQDTKTIFTDSVMEKPTQDP
QPALFDSETKISSQDTKTIFTDSIMEKPTQDPKPVLFDSKIETPLSTGVESSVESFLTGG
AVKADAYEKAVQDLGEMEMEKEDPTKRIQPVHLAETVEVQPTSIDASQASFSYAQDVPTN
TTSTATTVQTRAEEPVVASEEVAKRLPKISFPSGKPEDLLPRAGPADQPPARSIPPAIPK
EMASRGGAESPLPVFKEELSRAEDSPDSTSDPESIEPECSVSAATDSFVDFMRECLKSRQ
DESPEDLSHDFTAKVSTTAAVAGSGRPQAAPTVVLDFEQEELTIKALKELGESLEEEEDR
NSPASKPGVQKLPLSSQAAPESVSKQQTATSPVQSHPGVAEISPSGAPREVEEAPADDNQ
RAAAAAEHALAALLTQMSVWELIYWRDLKTSAAVFGVTLLLLLSLAAFSVVSVLSYLLLA
LLTVTISFRVFKSVVQAVQKSDEGHPFRAYIEKDISLSSESFSRYVDTGLRHCNCVLKQL
SRLFLVEDLVESLKLAVFMWLMTYVGAVFNGITLLIIAHILVFSIPVVYEKYKTQIDHYV
GIVHNQVKSVVSKVQAKVPGLSKRKPE
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctacgcagcctgaaaaaataccgtcctcgcagggcagcgacggttttgct
gatgcctccgccggacacaacgcaccttccccgggtaaagacgtcaagcccacccctccc
gcagcgtccatcgattcctttctttcttctcctcagcctgtatctctcattcagtctcct
caagaaggaataaaggggctcgtctccaataagccttcagaaagcgtggcgacttccctg
cggtttctatcccagcccggctcattcgctcctgtggtcttcgatagtcacagccaagct
ttgggcaacagaaaccttcctgagcctccagtggagctcaaggaagctacgaaaatagag
gaagtccgaggagtcggcactgattctgtgatcgaagctgtgtctagcgagtcccctcga
catgtcgcccccatttcgggaacaggggtgacgttccatgctttcagcaaccttggcctg
agctcttcccccgatgaggttcatggtaaaacccctgatgaatctccagccacgaaggtg
caagaactcagccagggtgtgttttcacgaggacagaccccagaagaacccaaagttcag
ggaaagccgaaggctgacagcgagacgtggggcgacggaggtttcatgctgttcaaagaa
agccattacgagagatctcccatcaaagagagcaccgaactgttctccccgttcaacaaa
gacccttctccggatcaagactcgcctgactcccctttcgaagtgctcgacgacagccag
agaaaacacagcttcgggaaagagttcctggaaaccgtgacgtcagagtgggtcccaact
cagatcgctgcagcaaaggtggtccctgatgtcgatcaagccaaagacgagaaggatcaa
ggaccttttggacctctggctgacatccatagcattgaagtgactaccaacctagagaaa
actatctggggaaaagaaccagcttacaaatccatggagaaagaagcagaggaggattct
gatgagtctagagacagcacgcctgagccagatgaggaagagaagaaaatatcttcagtc
tctggcagaaagactgccccgcctccaactccgcctcctcttcctcctcgagcaaaaccc
atcgatgcccaagtagaggagaaacaggccagtcctgtcaaagaatctagcgatgaggac
ctcgacttcttgccaaccgcctacatctgggaaaaaccagagaaagatgctaaaaaaaca
caaaaaactctggaaaaatcatgtgcagactttgaaaacttgcctccagcatattctgaa
gtagaaaccaccaccatcgccgctgccatcacctcctcttctccaccgagctacgccagc
tttaaattcaacactgaagagcttctcaaaagccagcagcctgcaaccgcgaaagtgcca
ggtccgaactggggtgtagactcggaaccagtggaaaacgtggacgcagacagttctggg
gagtccgatgacaccgtgatcgaggacatgtcggtagtgacggagcgagaaccagctgtt
cccaaatccaccgcgaccgtgaaagatccagaagagatggagcagaaagtagcttctgct
aaattggagaagcccctcttggtcccgatcatcaacgttatcgaaacagaggagcagatc
atcagtgacgacgagagtgatgagaaagcttccgaagtggtcgtggaacctgcagaccga
gctggaaaaggcagtagcactcctgtcgctggtactacgccacaggactccaaacctgcc
gatgctgtcgtagggaaagaggattctcagcccacgtcagctgaatctaaaaccgagaaa
ccaaagcaggattcagaaccagtcctagctgattctgaaatcaagagccctacccaggac
tcggaatgtatctttacggattccataatggagaaactgacgcaggaccccaaaccagtc
caagctgatcctaaaattgagacaccctcatctgttctagctgattttgcagaagataaa
tctgcacaggaccaaaaacctatcctgtttgattctgaaaccaagaaatctacacaagaa
tctcaaacttccttagattctgtaatggagaaaccaacacaggacccccaacctgtcctg
tttgactctgaaaccaagatttcttcacaagacactaaaaccatcttcactgattctgta
atggagaaaccaacacaggacccccaacctgccctgtttgactctgaaaccaagatttct
tcacaagacactaaaaccatcttcactgattctgtaatggagaaaccaacacaggacccc
caacctgccctgtttgactctgaaaccaagatttcttcacaagacactaaaaccatcttc
actgattctataatggagaaaccaacacaggatcccaaacctgtcctgtttgactctaaa
atcgagacgcctctttcaacaggggtggaaagcagtgtggaaagttttctgacgggagga
gctgtcaaagctgatgcttacgaaaaggcagttcaggatcttggggaaatggaaatggaa
aaggaagatcccaccaagaggatccagccagttcaccttgcagagactgtagaagtccag
cccaccagcattgacgcttcacaggcttcgttcagctatgcacaggatgtaccgaccaat
accaccagcacagccaccactgttcaaaccagagcagaggagcctgtggtggccagtgaa
gaagtagccaaacgcctccccaagatctccttcccttctggaaagccagaagacctcttg
cccagagcaggacccgcagaccaacctcccgctcggagcatcccgcctgccatcccgaaa
gaaatggcaagccgtggaggggcagagagcccgctgcctgtgttcaaggaagagctgtcg
cgtgcagaggactctccggacagcaccagtgacccggaaagcatcgaaccggagtgctct
gtctctgcagccaccgacagcttcgtggatttcatgagggaatgcctcaagtcccggcaa
gacgagtcgccagaagacctcagccatgattttacagccaaggtttcgaccacggcagcc
gtggcgggctccgggcgaccacaagccgcgccgaccgtggtcctggatttcgagcaagag
gagcttacaattaaggccctcaaggaactaggagagagcttagaggaggaggaagataga
aacagccctgcatctaaacctggagtccaaaagctgccgctgtcatcgcaagctgcccca
gaatccgtctcaaagcagcagaccgccacctctcccgttcagtcccacccaggggtggct
gagatctctccctcaggggctcctagagaggtagaggaggcacctgcagatgataaccag
agggcagcggccgctgcagagcatgcattagcagctttactaacccagatgtcagtgtgg
gagctgatctactggcgggatctgaagacgtctgccgctgtgttcggggtcaccctgctg
ctgctgctctccctggctgccttcagtgtggtcagcgtgctctcctacctgctcctggct
ctgctcaccgtcaccatctccttccgcgtcttcaagagcgtggtgcaggcggtgcagaaa
tcggacgaagggcatcccttcagggcctacattgagaaggacatcagtctgtcctcagag
tccttcagccgctacgtggacacgggcctgagacactgcaactgtgtcctcaagcaattg
agtcgtctctttctggtggaggacctggttgagtctctgaagctggcagtgttcatgtgg
ttgatgacctacgttggcgcggtcttcaatggcatcacgcttctcatcatagctcacatt
ctggtgttcagcatccctgttgtttatgagaagtacaagactcagatcgatcactatgtt
ggaattgtacacaatcaagtcaagtcagtcgtttcaaaggtccaggcaaaagtcccgggt
ttgtcgaagcgcaagcctgaataa
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