Polyodon spathula (Mississippi paddlefish): 121310051
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Entry
121310051 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: ras and Rab interactor 1-like
KO
K17638
Ras and Rab interactor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121310051
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
121310051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
SH2
RA
PRIMA1
Motif
Other DBs
NCBI-GeneID:
121310051
NCBI-ProteinID:
XP_041099190
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MQQDPVYDFPDSQPAEPLPVHRGSLKSISVLDRLLFTHSVWMQLSINSATALHILQREPP
GTFLVRKSSTSQKKVLCVRLVDDSMPGFVGQYIIREKDFTFSLEASSISFPDLCHLVSFY
CVSRDVLACPLALPAAIAKATSHKQLEAISHMGVEFWSSPLNFRGPRNGLPPPDLPPLDP
ADCATPVGPLSVFREFCPIQTRSPQELDYGSGRGALCFINPLFHQSQLSQGALLKRDKFK
HSFKVRISTETSSPLSPPAPPSPPPPPPPLLAKGARGKQQIPPSAPEQDSEYMLPSVAMS
RKVSLGQFAGLLKGASVLSPTGEEEEEEEEYQIPKPLQQRRNSEKLDPETEVLGGEEGEA
LILDRGRAPSLRELDSSSSLSSLEEEDESLSSDRPPLTRGTSFPTPRRPPHFSTLRKMSE
VFYSFFAPEKRACRLVEELSRDRHSSFGSLIQDFLTLTRETRGSGVSSAALLQTVRNFIT
QAKSFLLGCEELQPPIEALVTDEDMDFVLEKALYRCVLKPLKPHLDGCLQELHARDGSTQ
LMEDSLRAAQQGALERFGVRVGVPDPQGIAMVRRKLVLIQKAYSPIDKVLLLLQACKCVY
TAMRRGPGEECGADEFLPALSYVIVQCNMPQLPLEVEYMMELLGPSLLTGEGGYYLTSVY
ASLCLIQTQPEQLCRGTVTRRARDSLREWSRRRGNEGTQPLCQGQRCVRVVFRDCDCSTV
ETVLLSSTDTVDTLAQICALKFRVSDPSQYGVFLHQEGELRQLCPQDLAKQSGSGFSLTY
QRCKSHKLNRGGTVDLGEIPEPNPL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggaccctgtctatgacttccctgactctcagcctgcagagcccctgcctgtc
caccgggggtcgctcaagagcatcagcgtgctggaccgcctcctcttcacgcactctgtg
tggatgcagctctccatcaactctgccaccgccctgcacatcctgcagagggagcctccg
gggacgttcctggtgcgcaagtcctccacatcccagaagaaggtgctctgtgtcaggctg
gtggacgactccatgcctgggttcgtggggcagtacatcatccgagagaaggactttacc
ttctccctggaagcctcgtccatcagtttccctgatctctgccaccttgtttcattttac
tgtgtgagcagggatgtgcttgcctgcccgctggcgctgcctgcagccatcgccaaggca
acgtctcacaagcaactggaggccatctctcacatgggcgtggagttctggagctccccg
ctgaatttcaggggtcctcgaaacgggctcccccctccagacttgcccccgctggaccct
gcagactgtgccacccccgtgggacccctttccgtgttcagggaattctgcccgatccaa
acccgaagcccccaggagctggactacggctcgggccggggggctctgtgcttcatcaac
ccgctcttccaccagtcccagctgagccagggggcgctgctcaaacgagacaagttcaaa
cacagcttcaaggtgaggatctccaccgagacctccagccccctgtccccccccgctccc
ccctcccccccccctccaccgccccctctgctggctaagggggcgagagggaagcagcag
atccccccctcggctccagagcaggattcggagtacatgctgccctcggtggcgatgtcc
cggaaggtcagtttggggcagtttgcggggctcctcaagggggcgagcgtgctttcaccc
accggagaggaggaggaggaggaagaggagtaccagatacccaaaccactacagcagagg
aggaattctgaaaagctggatcctgaaactgaggtattaggaggagaagaaggtgaagct
ctgattctggatcggggccgggctccttccttaagagagctggacagcagcagttccctg
agcagcctggaggaggaggacgagagcctgagctcggatcggccccccctcacacgggga
accagctttcccaccccgcgccggcccccgcacttctccaccctgcgcaagatgagcgaa
gtcttctattccttcttcgccccggagaagagggcatgccggctggtggaggagctctct
cgggacaggcactccagcttcggctccctgatccaggacttcctgacgctgacccgggag
actcgcggctctggggtctctagcgccgccctgctgcagaccgtgaggaacttcatcacc
caggcaaagagcttcctgctgggctgtgaagagctgcagccccccatcgaggcgctcgtc
acagatgaggacatggacttcgtcctggagaaggcgctgtaccgttgtgtgctcaagccc
ctgaaacctcacctcgacggctgcctgcaggagttgcacgcgcgcgacggatccacgcag
ctcatggaggacagcctgcgcgcggcccagcagggggcgctggagcgcttcggggtgcga
gtgggcgtgccggacccccagggcattgctatggtgcggaggaagctggtgctgatacag
aaagcgtactcccccatcgacaaggtgctgctgctgcttcaggcttgcaagtgtgtgtac
accgccatgaggcgcgggccaggagaggagtgcggggcagacgagttcctgcccgccctc
tcgtacgtcatcgtgcagtgcaacatgccacagctccccctggaggtggagtacatgatg
gagctgctggggccatctctgctgactggagaaggtgggtactacctgaccagtgtctat
gccagcctgtgcctcatccagacccagccagagcagctctgccgaggcacagtgacccgc
agggcccgggactccctgagagagtggagccgtcgccggggaaacgagggcacacagccc
ctctgccagggacagaggtgtgtgcgtgttgttttccgggactgtgactgcagcacagtg
gagacggtgctcctgagctccacagacacagtggacacgctggcccagatctgcgcactc
aaattccgggtgtcggaccccagtcagtacggggtcttccttcatcaagagggggagctc
cggcagctctgcccccaagacctcgccaaacaatcaggctccggcttctccctcacctac
cagcgctgcaagagccacaaactgaacagagggggcactgtggacctgggggagattcca
gaacccaacccactctga
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