Polyodon spathula (Mississippi paddlefish): 121310093
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Entry
121310093 CDS
T07273
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121310093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121310093
Spliceosome [BR:
pspa03041
]
Complex A
Other components
Complex A specific factors
121310093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
RRM_1
KH-I_KHDC4-BBP
KH_1
RRM_5
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
121310093
NCBI-ProteinID:
XP_041099273
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MVKLFIGNLSQCTTADELRPLFSQYGKVKECDVVKNFGFVHMDSKEEAEEAIRNLHHYEL
NGQPMNVEISRSKTKASTKLHVGNINSSCTNQELRAKFEEYGPVIECDIVKEYAFVHMER
VEDAMEAIKGLDNTAFQDFGQKRSRKRSRWNDETPDQKTVIPGMPTVIPPGLSREQERAY
IVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREYRTRKKLEEERHLM
IQEMVALNPEFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECT
AKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIET
PEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSSEPRSITNATVCTKCGGAGHISSDC
KFTSSFAPRQGDPQSAQDKARMDKEYLSLMAELGEAPVPSSTGGGSNNHHQGRNSGPGNN
QGQQNRPPWMNSGHSENRPYQGMHGGGHSGHGGHHGFPPPMSNMHPNNGPPPPWMQPPPP
PMNQGHGPHGHHHMGLLPPPMGMLPPPPPPPNSQPPPPPSAPLLPWQQQQAPPPPPTSSM
ATSTPLPWQQNTITTSSPGSGTLPPWQQQQQQGSSAGSSAQPPPPMGNPSMVPPPPGVQP
PLPPGAPPPPPPTSSRLCRHDVRTPSASPSHGSLQLCYHDGHGCPRHAPLWDACAPSSPS
SELKRPPPSCSSRRLLHSDPAAAAALISPHTSQHI
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctcttcatcggcaacctgtcccagtgcaccacggcggacgagctgcggccg
ctcttctcccagtatgggaaggtcaaggagtgcgacgtggtcaagaacttcggcttcgtg
cacatggacagcaaggaggaggcggaggaggcgattcgcaacctgcaccactacgaactg
aacgggcagcccatgaacgtggagatcagccgcagcaagaccaaggcttccaccaagctc
cacgtgggcaacatcaacagcagctgcaccaaccaggagctgcgcgccaagttcgaggag
tacgggcccgtgatcgagtgcgacatcgtgaaggagtacgccttcgtgcacatggagaga
gtggaggatgccatggaggcgatcaaagggctggacaacaccgcgtttcaagattttggc
caaaagagatctcggaagcgcagccgctggaacgacgagaccccggatcagaagactgtg
attcccggaatgccgacggtcattcctccaggactgagccgggaacaggagagagcttat
atagtccaactgcagatcgaagacctgactcgtaaactgcgtacaggagacctgggaatc
cctcctaaccctgaggacagatccccgtctccggagcccatctataacagcgagggcaag
cgcttgaacacgagggagtatcgcacacgcaagaagctggaggaggagaggcacctgatg
atccaggagatggtcgccctcaacccagagttcaaaccacctgccgattacaaaccgcca
gccacgcgggtcagtgacaaggtgatgattcctcaggatgagtaccccgagatcaacttc
gtggggctgctcattggacccagaggtaacacgctgaagaacattgagaaggagtgcaca
gccaagatcatgatccgagggaagggctcggtgaaggaggggaaggtgggccgcaaggac
gggcagatgcttcctggagaggatgagcctctgcacgccctcgtcactgccaacaccatg
gagaacgtcaagaaggcagtggagcagattcgtaacatcctgaagcaggggatcgagacg
ccggaggatcagaatgacttgcggaagatgcagctgcgagagctggcccggctcaacggc
acgctgcgcgaggacgacaacaggatcctgaggccctggcaaagttcggagccccgcagc
atcaccaatgccaccgtctgcaccaagtgtggaggcgccggccacatctcctccgactgc
aagttcaccagctctttcgcccccaggcagggagacccccagtctgcccaggacaaggcg
cgcatggacaaggagtacctgtctctgatggctgagctgggggaggcacccgtcccctcc
tccactggggggggctccaacaaccaccatcaaggcaggaactctggaccaggcaacaac
cagggccagcagaaccgccccccctggatgaactccggccactctgagaaccgtccttac
caggggatgcacggagggggtcatagcgggcatgggggtcaccacggcttccctcccccc
atgtccaacatgcaccccaacaacgggccccctcccccctggatgcagcccccaccgccg
ccaatgaaccaggggcatggacctcatgggcaccaccacatgggtctgctgcctccacca
atgggaatgttaccaccgccccctcctccacccaatagccagcctccgcctcctccatca
gcaccactgctgccatggcaacagcagcaagccccacctcctccacccaccagcagcatg
gcaaccagtacaccactgccatggcaacagaacaccatcaccacctcctctcctggctct
ggaaccctccctccctggcagcagcaacagcagcagggctcctctgcgggctcctccgca
cagccccctccccccatgggcaacccctcaatggtgccccctcctcccggggtgcagccc
cccctgcctcccggcgcgccccctccccccccccccacctcctcccggctctgccggcat
gatgtacgcaccccctccgcctccccctcccatggatccctccaactttgttaccatgat
gggcatgggtgtcccaggcatgcccccctttgggatgcctgcgccccctcctccccctcc
tcagagctaaagcgacccccccctagctgtagcagtaggaggctcctccattctgacccg
gcagcagcagcagccttaatctcacctcacaccagtcaacacatttaa
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