Polyodon spathula (Mississippi paddlefish): 121310187
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Entry
121310187 CDS
T07273
Name
(RefSeq) actin-related protein 3B isoform X1
KO
K18584
actin-related protein 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
pspa04530
Tight junction
pspa04810
Regulation of actin cytoskeleton
pspa05100
Bacterial invasion of epithelial cells
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121310187
09144 Cellular community - eukaryotes
04530 Tight junction
121310187
09142 Cell motility
04810 Regulation of actin cytoskeleton
121310187
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121310187
05100 Bacterial invasion of epithelial cells
121310187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121310187
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121310187
04147 Exosome [BR:
pspa04147
]
121310187
Membrane trafficking [BR:
pspa04131
]
Others
Actin-binding proteins
Arp2/3 complex
121310187
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
121310187
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121310187
Exosomal proteins of other body fluids (saliva and urine)
121310187
Exosomal proteins of bladder cancer cells
121310187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
121310187
NCBI-ProteinID:
XP_041099420
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All DBs
Position
3:2284877..2299612
Genome browser
AA seq
367 aa
AA seq
DB search
MQGVDDLDFFIGDEAIDKPTYATKWPIRHGIIEDWDLMEKFMEQVIFKYLRAEPEDHFFL
MTEPPLNPPEHREYLAEIMFESFNVPGMYIAVQAVLALAASWTSRQVGSRTLTGVVIDSG
DGVTHAIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREIGIPPEQSLETAKAIKERY
SYICPDIVKEFSKYDADPDKWIKKYRGINAINKKEFLIDVGYERFLGPEIFFHPEFANPD
FVQPISDVVDEVIQYCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSA
ELSGGRIKPKPIEVQVITHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPSICRHN
AVFGVMS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcagggagtggatgatttagacttttttattggagatgaagctatagataagccaact
tacgcaacaaagtggccaataagacatggtataattgaagactgggatttgatggaaaag
tttatggagcaggtcatatttaaatatctacgcgctgaaccagaggaccatttttttcta
atgacagagcctcctctgaaccctccagagcacagagaatacctggcagaaatcatgttt
gaatcgtttaatgtaccaggcatgtacattgctgtgcaggccgttttggctttagcagcg
tcctggacttcaaggcaagttggttcgcggacacttacaggagttgtcatagacagtggg
gatggtgtcactcacgcaattccagtggctgaaggttatgtcattgggagctgcataaag
cacatccccattgcaggcagagatatcacgtattttattcagcagctcctgagagagcgg
gagataggaattcctcctgaacaatcattagaaacagcaaaggcaatcaaggaaaggtat
tcctacatctgcccagatatcgttaaagagttttcgaaatatgacgcagatcctgataaa
tggatcaagaaatacagaggtattaatgctatcaacaaaaaggaatttcttatagatgtt
ggctatgagaggttccttggtcctgagatcttctttcatccagagtttgccaaccctgat
tttgtgcagcccatttcagacgtagtggatgaagtaatacagtattgccccatagatgtc
aggcggccattatacaagaatatcgtcctttcaggaggatccacaatgttcagggacttt
ggacgacgtttacagagggatctgaagagagtggtagatgcgaggttaaaacttagtgca
gagttaagcggtggcaggataaagcccaaaccaattgaagttcaagtgataacacatcac
atgcaacgctatgcagtttggtttggaggatccatgctggcttcaacacctgagtttttc
caagtgtgccacactaagaaggattatgaagaatacggtcccagtatctgtcgccacaac
gccgtttttggagtcatgtcataa
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