Polyodon spathula (Mississippi paddlefish): 121310373
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Entry
121310373 CDS
T07273
Name
(RefSeq) ubiquitin-protein ligase E3C-like
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121310373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121310373
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121310373
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
HECT type E3
121310373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF3335
Motif
Other DBs
NCBI-GeneID:
121310373
NCBI-ProteinID:
XP_041099512
LinkDB
All DBs
Position
3:3445418..3492658
Genome browser
AA seq
1083 aa
AA seq
DB search
MYSFGGDFKTRPKVSLGGASRKEEKSSLLHRTQEERRKREDERQRLKNAIIIQSYVRGYK
DRKQQYAIQRSEFDYCVCLAQSGGGFSISDAASLSLLVRRLLFFYRPSEDSNRLIWMCQN
LVKSNVPFVKQLAGPDRQTCLFQIQRMLGLCCRILQSCTDDKLSVAVPMRMLEVFSAEKT
YLPVLQDANCVASLIEQVLHYVVHKGYYRTLYILVNHKLPSCLEYCDAPHVPYASALLEH
VLKPLYFTYSSCSQGARQYVFAGFMEEFISSPFTDQIFHFFIPALADARCSFPFEPFLHA
LLGTVSSSLLTHVKAPWLLYFVLAVGETHLGSLSEEGLLLYLRTLQTLLPQLPVSVTSTS
RQEVISDSDDDEEDGGMKTMSSQEDSKISVQFITEQCIHKLDTKQQTNALLNLVWRDCAS
EDVFTMMASICHTLMVQHRMMVPKVRLLYSLAFNARFLRHLWHLITSMTTKMITGSMVPL
LQVISRGSPMSPEDSNRLIPLFYLFSSLFSHSLISIHDSEFFGIPTEGQSQSSMMPFTLL
ELVSLSRCLRDACLGIIQLAYPETKPEHREEYIAAFKSVGVKTNSEIQQRIQAEQKQWIQ
LFKVITNLVKMLKARDIRRHFCPSEHWLSQEVNIRADKVTQLYVPSARHVWRIRRMGRIG
PLQSTLDVGMEPPQLSVSEERQLAILTELPFVVPFEERVKIFQRLIFADKRDIQGDGPFL
DGINVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAHGLDEAGIDGGGIFREFLNEL
LKSGFNPNQGFFKTTNEGLLYPSPTAQMLVGNSFARHYYFLGRILGKALYENMLVELPFA
SFFLSKLLGTSADVDIHHLASLDPEMYRNLLFLKSYEEDVEDLGLNFTVVNNDLGEAQVV
ELKLGGKDITVTTANRIAYIHLVADYRLNKQIRPHCLAFRQGLANVVNLEWLRMFDQQEL
QILISGAHIPISLDDLKKFTNYSGGYSATHPVIKTFWEVVESFTDEEKRKLLKFVTSCSR
PPLLGFKELYPAFCIHNGGSDLERLPSASTCMNLLKLPEFCDAHLMRNKLLYAIESSAGF
ELS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtatagctttggaggagatttcaaaacacgacccaaggtgtctcttgggggagcgagt
agaaaggaggaaaagtcctcacttttacaccgtacacaggaagaaagaaggaaaagagag
gatgaaagacaaagactgaagaatgcaattattattcaatcatatgtacgaggctacaaa
gacagaaaacagcaatatgccatccagagaagcgagtttgattactgtgtctgcttagca
caatcaggcgggggcttttccatcagtgatgcagctagtttgagtctgttggtacgtcgg
ctgctctttttttacaggccgagtgaagattcgaatagactgatatggatgtgtcagaat
ttggtgaagtccaatgtcccgtttgtcaagcagctagcaggccctgacagacaaacatgc
ttgttccagatacagaggatgctgggcttatgttgcaggattctgcagtcttgcacggat
gacaaattaagtgttgcagttcctatgagaatgctggaagtcttttctgcagagaaaaca
tatttgcctgttttgcaagatgcaaattgtgtagcatctttaattgaacaagttttgcac
tatgtggtacataaaggatactacaggacactttacattttagtaaatcacaagcttcca
tcctgtttggagtattgcgatgctcctcatgttccctatgccagcgctctgctggagcat
gttctcaagccattgtactttacttattcctcatgttcacagggtgccaggcagtatgtt
tttgcaggcttcatggaggagtttatatcttcgccgttcacggatcagatattccacttt
ttcattccagcactggctgatgctcgttgctctttcccttttgaaccatttctgcatgca
ttgctgggcacagtgagctcttctctgctgactcatgtcaaggcaccttggctgttatat
tttgtcctggctgttggtgaaacacacttaggtagcctctcagaagaaggcttgctgctg
tacttgagaacactacaaaccctgctaccccagttacccgtgtctgtgaccagcaccagc
agacaggaggtcatcagtgactcggatgatgatgaggaggatggtgggatgaaaacaatg
tcttcccaggaggatagcaagatatcagtccagttcataacagagcaatgcatacacaag
ctggacacaaagcagcagacaaacgcactcctgaacctggtgtggcgagattgtgccagt
gaggacgtcttcactatgatggcgtcgatttgtcacacactgatggtgcagcatcgtatg
atggtcccaaaagtgagacttctgtacagtttggccttcaatgcaaggtttttgaggcac
ctttggcacttaataacttcaatgacaacaaaaatgataaccgggtccatggttcccctg
ctacaggtgatctcgcggggttcaccaatgtcgccagaagactccaataggctcataccc
ctcttctatctcttcagttctctgttcagtcattcactcatttctattcatgacagcgaa
ttcttcggaattcccacggaagggcagagccagtcgtccatgatgccattcacattgttg
gaactggtttcgctatcacgctgccttcgagatgcctgcttaggaatcatccagctggct
tacccagaaaccaagcctgagcaccgtgaggaatacattgcagcgttcaagagcgtgggg
gtgaaaaccaacagcgagattcagcagcgcatccaggcagaacagaagcagtggattcag
cttttcaaggttattaccaatctagtaaagatgctgaaagctcgagatataagaaggcat
ttctgtccatctgagcactggctgtcgcaggaagtcaacatcagagctgataaggtcaca
cagctttatgttccatcagctagacatgtgtggagaattcgcagaatggggagaatcgga
cctttacagtcaacattggacgttgggatggaaccacctcagctgtctgtgtcagaagag
cgacaacttgccatcttaacagagctaccatttgtggttccttttgaagaaagagtaaag
atcttccagaggctgatctttgctgataaacgtgacattcaaggggatgggccatttttg
gatggaattaatgttactattcgacgtaactatatttatgaagatgcttatgacaagctt
tcaccagaaaatgaacctgacctgaagaagagaatccgtgtacacctcctgaatgcccac
ggtcttgatgaagctggcatcgatggaggtggcatattcagagaattcctaaatgaactg
cttaaatccgggtttaatccaaaccaagggttttttaaaaccactaatgaagggctgctg
taccccagtcctacagcacagatgttggttgggaattcttttgccagacactactacttt
ctcgggagaatattaggaaaggctctttatgaaaacatgcttgtggagcttccgtttgcc
agtttcttcctgtccaagttgctgggcaccagcgcggacgttgatattcaccacctggct
tcgttggatcctgagatgtacagaaacctgcttttcttaaagagctacgaggaggacgtg
gaggacctggggctcaacttcaccgtggtgaacaacgacctgggagaggcacaggtggtt
gagttgaagctgggaggcaaggatatcacagtcactacagcgaacaggatagcatatatc
cacctggtagcagactacaggctgaacaaacagatccgaccccactgcctggccttcaga
cagggactggccaatgtggttaatctggaatggctccggatgttcgatcagcaagaactg
cagatactgatttccggggcacatattcccattagtctcgatgacctcaagaaatttaca
aactattcaggaggttactcagcaactcatcctgtgattaaaaccttttgggaagttgtt
gaaagttttacagatgaagaaaagcgcaaactgctcaagtttgtcacaagctgctccaga
cctcctttacttggatttaaggagctgtaccctgcgttttgtatacacaatggaggaagt
gatctggagcgcttgcccagtgctagcacctgcatgaacttgctcaagcttccagagttt
tgtgacgcgcatctgatgaggaacaagctcctttatgctatcgaatcttcagccgggttt
gagctgagctga
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