Polyodon spathula (Mississippi paddlefish): 121310454
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Entry
121310454 CDS
T07273
Name
(RefSeq) transcription factor Sox-7-like
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121310454
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
121310454
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sox17_18_mid
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
121310454
NCBI-ProteinID:
XP_041099566
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
RSVKETLIFIYCQRLTLLIIFCFVLGKSWKALNPSQKRPYVEEAERLRVQHMQDYPNYKY
RPRRKKQLKGICKRADPSFLLNNLSPDQNSIPDNRRPGLDKKEESGYSSSPGLPIIRSFR
EPPSSNASSGTYPYGLPTPPEMSPLDHIDHDLSFYSSSCPEEARPHGNRHTYHPEYTQSN
NQCDGHLGQMPMSQAGSTMIVSASSCPPPLFYYTPPYNSMQHHILTHRGQLSPPPEQQNL
ETLNQISQAELLGEMDRNEFDQYLNSTGHPDHNGVTITGHIQVTPAACTNSSSETSLISV
LADATAAYYNNYGIS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
agatcggtgaaagagactttaatttttatttactgccagagattgacattgctgatcatc
ttttgttttgttttaggcaagtcttggaaagccctgaacccttcccaaaagagaccatat
gtggaggaagctgaaaggctgagggtgcagcacatgcaggactaccccaactacaagtac
aggccacggaggaagaagcagcttaagggtatctgcaagcgagccgatcccagtttccta
cttaacaacctttctccggatcagaactccatcccggacaaccgtagaccaggcctggac
aagaaggaggaaagtggctactcctccagtccaggtctccccatcatcagaagttttagg
gagcctccaagctctaatgccagctctggtacttacccgtatgggctgcccaccccacct
gagatgtcaccgttggaccatatagaccatgatctgtccttctactcctcttcctgccct
gaagaagctcgtccccatgggaacagacatacctaccatcccgaatacacccaaagcaac
aaccagtgtgatggccacctgggtcaaatgcccatgtctcaagcagggtctactatgatt
gtctctgcttccagctgcccacccccgctcttttactacaccccaccttataactccatg
cagcaccacatcctaacccaccggggtcaactgtccccacctccagagcaacaaaatctg
gagaccttaaatcagatcagccaagcagaactcttaggagagatggacaggaatgagttt
gaccagtatttaaactccacaggccacccagatcacaatggggtgaccatcactgggcac
atccaggtcactccagcagcttgtaccaacagttcttcagaaaccagtctcatctccgtg
ctggctgatgctacagcagcttactacaacaactacggcatttcctaa
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