Polyodon spathula (Mississippi paddlefish): 121310805
Help
Entry
121310805 CDS
T07273
Name
(RefSeq) double-stranded RNA-specific editase B2-like
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121310805
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121310805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
DSRM_2
Motif
Other DBs
NCBI-GeneID:
121310805
NCBI-ProteinID:
XP_041099662
LinkDB
All DBs
Position
3:complement(4503927..4660094)
Genome browser
AA seq
768 aa
AA seq
DB search
MASVLGNNTRASGTPNSQLKCKFKRRRRRRSKRKEKVSMLSAFIGPFKYLSPGATSTQDE
DNLSTSSAEVKENRNVGNLEECSIVTGDRQPFCYTDIPRGGTSGLKRKRPLEGNNGHLCK
LQLIYKKLSWSVTPKNALVQLNELKPGLQYKIVSQTGPVHAPVFSISVEVNGLTFEGKGP
TKKKAKMKAAELALKSFVQFPNASQAHFAMGNLSNPSTDFTSDQADFPDTLFKEFESSAH
SDNYPCYRPSENELISSAYRHGRLLRHTLDLMVQAKQNKHKMAALADCEKNPVVLLNELR
PGLRYICLSEAVERQHIKSFVMAVRVDGETFEGSGRSKKLAKAQAAQTALQALFNIRLAP
EGKTSHTPSRNRCPHLPQEFADSVFQLVTEKFRELTDSCTSLHARHKVLAGIVMTRGLDI
RQAQVIALSTGTKCINGEYISDQGLVVNDCHAEIVVRRAFIRFLYSQLELLLSKQREDRE
QSIFIRHKEAGYRLRENILFHMYISTSPCGDARLNSPYEITSHLHSGKHIVKKFHGHLRT
KIESGEGTVPVRGHSAVQTWDGVMQGEQLVTMSCTDKIARWNVLGIQGSLLSYFIEPIYL
HSFIVGSLHHIGHFSRTVSHRVQHIGQLPASYKQNQPLLSGLSSTESRQPGKSPCFSVNW
TAGDTGLEVINTTTGKKKDSSSSSRLCKLTLFTRWAKLYDKLSMQVPSHGEMPVMYCEAK
LAAGTYQTVKQQLFKSLQEAGLGTWIKKPPEQGHFLLPVETAHVSTPL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtccttggaaacaacacccgtgcttcgggaactccaaacagccaactgaaa
tgcaaattcaagagaaggaggagaaggaggtctaagagaaaagagaaagtaagcatgctt
tctgctttcattggtcctttcaagtatttgagtccaggggctacgagcacacaggatgaa
gataatttaagtaccagcagcgcagaagtgaaggagaatcggaatgtaggcaatctggag
gaatgttccattgttaccggggaccggcagccattctgttacacagacatacccaggggc
gggacttcaggtctaaaaaggaaaaggcctcttgaaggaaacaacggacacctctgtaaa
ctgcagctgatctataagaaactctcctggtcagtcacaccaaagaacgccctggttcaa
ctcaatgagctaaaaccgggcttacaatacaaaatagtctcccagactggacctgtgcac
gcacctgttttttccatctccgtggaggtaaacggactcacctttgaaggcaaggggcct
acaaaaaagaaggcaaaaatgaaggctgctgagctggccctcaagtcttttgtacagttt
ccaaacgcttctcaggcccactttgcaatgggaaacctcagcaacccgtcaacagacttt
acctctgaccaggccgacttcccagacactctgttcaaagagtttgagtcgtctgcacac
agcgacaactacccatgctacaggccctcagaaaatgaattgatctccagtgcttatcga
catgggagattactccgccacacgctggacttaatggtccaagccaaacaaaacaagcac
aagatggcagccctggcagactgcgagaagaacccagtggtgctgctaaatgagctgcga
ccggggctgaggtacatttgcctctcggaggctgtggagaggcaacacatcaagagtttt
gtaatggcagtgagggttgatggggaaacatttgaaggctctggacgcagtaagaagctg
gcaaaggcccaggcagcacaaacagctctacaagccctctttaacatcaggttggcacct
gaggggaaaaccagccatacgcccagcaggaatagatgccctcatttaccacaggaattt
gcagattcagtgttccagttggtgactgagaaattccgtgagttgacagacagctgtaca
tccttgcatgcacgccacaaagtcttggcaggaatcgtaatgaccagaggtttggacatc
aggcaagcacaagtgattgcattatcgactggtaccaaatgtatcaacggtgaatatatc
agtgaccaggggcttgttgtcaatgactgccatgctgaaattgttgtacggagagcattc
attcgattcctttactctcagctggagctccttttgagcaaacagcgagaggacagggag
caatcaatcttcatccggcacaaggaggcaggctacagactgagagagaacatcctgttc
cacatgtacatcagcacctcaccctgtggagatgcacgcctcaattctccctatgagatt
acatcccacttgcacagcggcaagcacattgtgaagaaattccacgggcacctacggacg
aagatcgaatctggagaggggaccgttcctgtgcgaggtcacagtgcagtgcagacctgg
gacggggtgatgcagggggagcagctcgtcaccatgtcctgcacggataaaattgccaga
tggaatgttcttggtatccagggatcgctcctcagctactttatcgagcctatctacctg
cacagcttcattgtggggagccttcatcacatcggtcacttctcaaggacagtgagccat
cgggtacagcacattggtcagctgccagcgtcatacaagcagaatcagccacttctcagt
ggattaagcagcactgagagccggcagccaggaaagtccccttgcttcagtgtgaactgg
actgcgggagacactggactggaggtcattaacaccacgacaggcaagaagaaggactcg
agcagctcatcccggctctgcaagctcacactcttcactcgctgggcaaagctttatgac
aagctgagcatgcaagtgccgagccatggggaaatgccagtgatgtactgtgaagccaag
ctggctgctggaacatatcaaactgtgaagcagcagttgtttaaatcgctgcaggaagcc
ggactgggcacctggataaagaagccgccggagcagggtcactttctactgcctgtagaa
acggcacatgtcagcacccccctgtga
DBGET
integrated database retrieval system
