Polyodon spathula (Mississippi paddlefish): 121310812
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Entry
121310812 CDS
T07273
Symbol
slc27a1a
Name
(RefSeq) LOW QUALITY PROTEIN: long-chain fatty acid transport protein 1a
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03320
PPAR signaling pathway
pspa04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121310812 (slc27a1a)
09158 Development and regeneration
04382 Cornified envelope formation
121310812 (slc27a1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspa01004
]
121310812 (slc27a1a)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121310812 (slc27a1a)
Lipid biosynthesis proteins [BR:
pspa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121310812 (slc27a1a)
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
121310812 (slc27a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121310812
NCBI-ProteinID:
XP_041099665
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MRGLASASLSMGSLSLLRLLGVHWSWGLAVSLGVYLGTGGWRYLRIVVKTAKRDLIGLYV
LLRVKFSLYRHLRAGSTIPSIFSATARRHPGKPALIQEGTGEVWSFSQLEELSNGVAQLV
LSLGLAPGAVVAVFMESRPLFVALWLGMAKVGVEAALINFNLRRDSLLHCVGVSGARAVI
FGAELAEAVWEVRESLSKDMLCLCTGDLSPDQLLQIGAKPLDPLLASASRLPPPVTHSKG
FNDRLFYVYTSGTTGMPKAAIVVHSRYYRIAAFGYHSFGMRHDDVLYDCXPLYHSAGNIM
GVGQCLINGLTVVIKKKFSASKFWEDCIKYDCTVVQYIGEICRYLLSQPRWAQENRHRVR
LAVGNGLRPSVWEAFTQRFNIKQVGEFYGATECNCSIANMDGKVGSCGFNSRILPNVYPI
RLVKVNEETMELIRGQDGLSVPCAPGEPGLLVGQINQQDPLRRFDGYASEAATSKKICNN
VFKQGDTAYLSGDVLVMDELGYMYFQDRSGDTFRWRGENVSTTEVEGTLSSLLNQADVAV
YGVPVPGVEGKAGMVSIAVQDGLFDPAQFYTEIQKVLPPYARPVFLRISPEVATTSTYKI
QKTRLQKEGFDPRHSPDQIYFLNSRAGRYDPLDESLHSAIVEGRVSV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcggggtctggccagcgcctccctgtccatgggctctctcagcctgctccgtctcctc
ggggtccactggtcctggggtctggccgtcagcctgggggtctacctgggcactgggggc
tggcgttacctccgcatcgtggtcaagactgccaagagagacctcatcggcctgtatgtg
ctcctccgggtcaagttctccctctacagacacctccgggctggcagcacgatcccctcc
atcttcagcgccacggcccgcaggcacccgggcaagcccgccctgatccaggagggcacc
ggggaggtgtggagcttctcccagctggaggagctgtccaacggggtggcccagctcgtg
ctgtccctgggactggctcctggagccgtggtggctgtgttcatggagagccggcccctc
ttcgtggctctgtggctgggcatggcaaaggtgggcgtggaggccgccctcatcaacttc
aacctgcgacgggattcgctgctgcactgcgtgggcgtgtccggggcgcgggctgtcatc
tttggggcggagctagcagaggcggtgtgggaggtgagagagtccctcagtaaagacatg
ctgtgcctctgtactggagatctcagccctgatcaactgcttcagatcggagcgaaaccc
ctggatcctctgctggcctcggcttccagactgcctcccccagtcacacacagcaagggc
ttcaacgatcgcctcttttatgtctacacgtctggtaccaccggcatgcccaaagcagcc
attgtagtgcacagcaggtattaccgcatcgctgccttcgggtaccactcctttggaatg
cgtcatgatgacgtgctgtacgactgcntccctctctaccactctgcagggaacatcatg
ggagtggggcagtgtctgatcaacggtctcactgttgtcatcaaaaagaaattctcagcc
agcaaattctgggaggactgcatcaaatacgactgcactgtggtgcagtacatcggggag
atctgccggtacctgctgagccagccccgctgggcccaggagaacaggcaccgcgtgagg
ctggctgtagggaacgggctgagacccagcgtgtgggaggccttcactcagagattcaac
atcaagcaagtgggggagttctacggggccacagagtgcaattgcagcatcgccaacatg
gacgggaaggtgggatcgtgtggcttcaacagcaggatcctgcccaatgtctaccccatc
cgactggtcaaggtgaacgaggaaaccatggagctgatcagaggccaggacgggctgagt
gtgccctgcgcacctggagagcccgggttgctggtgggtcagatcaatcagcaggacccc
ctgcgcaggtttgacggctacgccagcgaggcagcgaccagcaagaagatctgcaacaac
gtgtttaaacagggagacacagcctacctctcaggagacgtgctggtaatggacgagctg
ggctacatgtatttccaggaccgcagtggggacacgttccgctggcgaggggagaacgtc
tccaccacggaggtggaggggaccctgagctccctgctcaaccaggccgacgtggccgtg
tacggggtcccagtgccaggtgtggaagggaaggcaggcatggtctctatcgcagtgcag
gacggtctcttcgacccggctcagttctacacagagatccagaaggttctgcccccgtac
gcccggcccgtcttcctgagaatctcccccgaagtggccaccacaagcacttacaagatc
cagaagacgcgtttacagaaggaggggtttgacccccgccactcccccgaccagatctac
ttcctgaactcgcgggcggggcgctacgatcccctggacgagagtctgcacagcgccata
gtggaggggcgggtctctgtgtga
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integrated database retrieval system
