Polyodon spathula (Mississippi paddlefish): 121311369
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Entry
121311369 CDS
T07273
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121311369
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
121311369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_15
zf-C2H2_6
Homeodomain
Zf-C2H2_ZNF451_C
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
121311369
NCBI-ProteinID:
XP_041099868
LinkDB
All DBs
Position
3:complement(6594737..6680089)
Genome browser
AA seq
1150 aa
AA seq
DB search
MCGLLTSHTSYLVRNADVCIGTSVIDILPVTSYNNVVEANSDSDDEDKLHIVEEESVTDA
ADCENNVPDDDLPSNHAVLPENGQGEEEEEEAWEEETKGEDTLGPEAQPGDVGFKVDDAC
GSEAEDEQNNDRIVEEMLQQGDTAVIYPEAPEEEQRQGTPEASCHDENGTPDAFSQLLTC
PYCDRGYKRYTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTAHKSGRDQRHVV
QSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKC
IGVMPVNGRSRLAGKTSQCPSPSLSSSPSTPARTQLREKGDNSKPLQEQLPANQIKVEPV
DYEYKPIVVTSGISCATPLQNGAFNGGSPLQTTASPQGVVQAVVLPAVGLVSPISINLSD
IQNVLKVAVDGNIIRQVLESAHANAAKEQGGVQPGGHSLISAFSLPLVDQDGTTKIIINY
SLEQQPSQVQILPQSLKKENPSPVEICKTEKLPEDLTVKPGKSKIPKTENSSSTCLLCDD
CPGGLDALQEIKHCNLKGEGGILTSQVNGENAEKTDSTVSSPTAEGSLSLGQPPLKNLLS
LLKAYYALNAQPTTEELSKISDSVSLPLDVVKKWFEKMQTGQIPVGAASPSEHEAISSES
DETQNSLDPAGDVPDSTTTAESPLQLTKTQVILITPSSVKTNSSRTNTPSPSPLNLSSTG
TVLVKTEEDTEEGAQVEPLDLSLPKQTREEMEQATSTSVYQNSVYSVQEEPLNLTCTKKE
QPQSDSINTSPNPVYVCPPSANPINIAIPTVTTQLPAIVAITDQGSVPCLRALGTNQQTI
LIPQVTYAYSTLDTSPAVPEAQQKIVQANGSQEERQETSSEGVSTVEDQNDSDSTPPRKK
MRKTEHGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICNKAFKHKHHLIEHMRLHS
GEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEEREGPELNEEEEEGEGPGAVGEIL
PGEQLSGSRAASPPSLLDSDDRESSTRGEEEEEEETEEEEEEETETKEETETKEETETKE
EGEDMQVGEKEHKDSEEDQEENGEEMETEEGAGEKEMGTDENPSEIPWVNREDSEEEKTP
EKIDGDNDKI
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggattgcttacctcacacaccagctaccttgtgagaaatgcagatgtgtgcatt
ggaaccagtgtcattgatatccttccagttaccagctataacaacgtggtggaagcgaac
tccgattcagatgatgaagacaagctacatatcgtggaggaggagagcgtgacagacgct
gcagactgtgagaacaatgtgccagacgatgacttgccgagcaaccatgcagtattacca
gagaacgggcaaggagaggaggaggaggaggaagcttgggaggaagaaacaaaaggagaa
gacaccttggggcctgaagctcagccaggggacgttggatttaaagtagacgatgcatgt
ggctctgaagctgaagatgaacaaaacaatgaccggatcgtagaggaaatgctgcagcag
ggagacactgctgtcatctacccagaggcacctgaggaggaacagaggcaggggacaccc
gaagccagctgccacgacgagaacgggacgccagatgcattttcacagctgctcacatgt
ccgtactgtgacagaggatacaagcgatacacctctctgaaagaacacatcaagtaccgg
cacgagaagaatgaagacaacttcagctgctccctctgcagttacacgtttgcctacaga
acacaacttgaacgtcacatgacggcacacaaatctgggcgggatcagcgtcatgtagta
cagtctgggggcaatcggaaatttaagtgcactgaatgtggaaaggcatttaaatacaag
caccacctaaaggagcacttgcgtatccacagtggggagaagccctacgaatgcccgaac
tgcaagaagcgtttttcccactccggctcgtacagctcccacattagtagtaagaaatgc
atcggtgtgatgcctgtgaacggacggtcccggctggcgggcaagacatctcagtgccct
tctccgtccctctcttcatcgcccagcacccctgccagaacacagctccgggagaaaggt
gacaacagcaagcctttacaagaacagcttcccgccaaccaaatcaaagtcgaacctgtg
gattacgagtacaaaccaatagtggtgacctccggaatcagctgtgccacgcctttgcaa
aacggggctttcaacggtggcagtccgctgcagaccacggcttcaccccagggtgtggtg
caagctgtggtcctgccagctgttgggctggtctcccctatcagcatcaacctaagcgac
atccagaatgttctcaaagtagctgtagatgggaacattattcgtcaagtcctagagagc
gcccacgccaatgcagccaaagaacaaggtggagtccagccagggggccattccctcatc
tcagcattcagtcttcctttggttgatcaagatggaacaaccaaaatcatcatcaactac
agtttggagcagcagcccagccaagtccagattctgccacagagcttgaagaaggagaac
cccagccccgtcgaaatctgtaaaactgagaagttacccgaagacctcactgttaagcct
gggaaaagcaaaattcccaagactgaaaacagcagcagcacgtgtctactgtgcgatgac
tgtcctggcggtttggatgcacttcaagagattaagcactgtaatttaaaaggcgaaggt
ggtattctgacttctcaggttaatggagagaatgccgagaaaacagattccactgtttca
tcccccaccgctgagggaagtctatccctcggccagccccccttaaagaacctcttgtca
ctcctaaaggcatactatgccttgaatgcacagcctaccacagaggagctctcgaagatt
tccgattcagtaagcttaccactagacgtggtaaagaagtggtttgaaaagatgcagact
gggcagatccctgtgggagctgccagtccttctgaacacgaggccatttcttctgaaagt
gatgaaactcagaatagtttagatcccgcaggagatgtaccggacagcacgacaactgca
gagagtccacttcaattgactaaaacccaagttattttaataaccccttcaagcgtgaaa
acaaatagctccagaactaacacaccttccccatcaccactaaatctctcttcaaccggg
actgtgctcgtgaagacagaagaggacactgaggaaggggcacaggtggaacccctcgac
ctatcactaccaaagcaaaccagagaggaaatggaacaggccaccagtaccagtgtttat
caaaacagtgtttactccgttcaagaagaacccttgaacttaacttgcacaaagaaggag
cagccgcaaagtgacagtattaatacaagcccaaatcctgtttatgtttgcccaccaagt
gccaatcccattaacattgctatacccacagttaccactcagctacctgcgattgtggcc
attaccgaccagggcagtgtcccgtgtctgagagctctgggtaccaaccaacagactata
ctaattccacaggttacttacgcatattccactttagacaccagtcctgcagtaccagaa
gcccagcagaaaatagtgcaagcgaatggaagccaggaggagaggcaagagacgagctcc
gagggcgtctcgaccgtcgaagatcagaatgactcagactctactcctcccaggaagaag
atgagaaaaacagaacatggcatgtacgcctgtgacctgtgtgataaaatattccagaag
agtagctcccttttgagacacaagtatgagcacacaggtaaaaggcctcatgagtgtgga
atctgcaacaaggctttcaaacacaagcaccacttgatagaacacatgcgactgcactca
ggggagaaaccgtaccagtgtgacaagtgtggcaagcgtttctctcactcaggctcctac
tcgcagcatatgaaccaccgctactcttactgcaagagagaggccgaggagcgcgagggc
ccagagctcaacgaggaagaggaggagggggaggggcccggagccgtgggggagatcctc
cccggagagcagctgtcaggcagtcgggctgcctcccctccctccctgctggactcagac
gacagagaaagcagcacacgtggggaggaggaagaggaggaggagacggaggaagaggag
gaggaggagacagagacgaaggaggagacggagacaaaggaggagacagaaacgaaggag
gaaggcgaagatatgcaagtaggagaaaaggaacacaaggattcagaggaggatcaggaa
gagaacggggaagaaatggagacagaagagggggcaggtgaaaaggaaatgggcacagac
gaaaatccaagtgagattccgtgggttaatagggaggattcagaagaggaaaaaacgcca
gaaaaaattgacggtgacaacgataaaatatga
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