Polyodon spathula (Mississippi paddlefish): 121311861
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Entry
121311861 CDS
T07273
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1-like isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121311861
Peptidases and inhibitors [BR:
pspa01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
121311861
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GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_22
AAA_16
AAA_5
TIP49
RuvB_N
AAA_lid_PRS2_C
Mg_chelatase
IstB_IS21
AAA_28
DUF815
nSTAND3
AAA_33
AAA_18
AAA_14
Beta-lactamase
AAA_17
PhoH
Motif
Other DBs
NCBI-GeneID:
121311861
NCBI-ProteinID:
XP_041099955
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Position
3:complement(7708278..7721240)
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AA seq
730 aa
AA seq
DB search
MFSLSYTFQPQVTIPLSHLINAFHSLKSSASSVGTASIQCLQREPAPEHDFQSSEPSIIL
RELGLNDLKTSHLDDLVNRLLPGVSTEQCLSHSHWRTSHVSANSFFHNKHGFSSSTLGLL
GTPTLCRQHTRPLQAFCSDLQNWPVQIQNRGFKTLKTKTRRLQSGNERHAESDGYTSSFM
KGLLFRDKRPEVESLDKLMKNKSIPEPQQDAFKTGFAEGFLKAQALTQRTQDSLRRTRLI
LLILLLLGIYGLSRTPFLSVRFRTTSGLDAAVDPVQMKNVTFEHVKGAEEAKNELQEVVE
FLKNPQKFTVLGGKLPKGILLIGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVG
ASRIRNLFKEAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGV
IIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLKKIKVDPAGVDPERIA
RGTVGFSGADLENLVNQAALKAAVDEKDMVTMEDLEFAKDKILMGPERRSVEIDKRNKTI
TAYHESGHAIVAFYTKDAMPINKATIMPRGPTLGHVSLLPENDRWSETRSQLLAQMDVSM
GGRVAEELIFGNENITTGKSAMFYCISKKGASSDFDNATKIAKMMVTKFGMSEKLGVMTY
TDTAKLSPETQAAIEQEVRILLKDSYERAKHILKSRSKEHKYLADALLTYETLNAKEIQI
ILDGKNLEPR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgttttctctttcttatacgttccagccgcaggtaacgattcctttgagtcacctcatc
aatgccttccattctctgaaaagctcagccagctctgtgggcacagcatcaattcagtgt
cttcagagagagcctgcaccagagcatgactttcaaagcagtgagccctctattatcctg
agggaattgggtctgaacgatctgaaaaccagtcatctggatgacctggtgaaccgactc
cttcccggtgtttcaactgagcagtgcctgagccactctcactggagaacgtcacacgtt
tcagcaaattctttttttcacaataagcatggattctccagtagcactttgggtctgttg
ggcacacccacactatgcaggcagcacacacgtccactacaggcattttgctcagatctt
cagaattggccagttcagatccagaatcgtggctttaaaactctgaaaaccaaaaccaga
cggctgcagtccggtaatgaacgtcacgcagaatcagatggatacacctcatcattcatg
aagggacttctgtttcgagacaagagaccagaagtggaaagtttagacaaactgatgaaa
aataaaagcatccctgaaccccagcaagatgccttcaaaactggatttgcagagggattc
ttgaaagctcaggcactcacacaacgaacacaggattctttgagaagaacacgtctgatt
ctgctcattctgctgctgcttggtatttatgggctgtccagaaccccgtttctatctgtg
cgattccgaacaacatcaggattagatgctgcagtggatccagtccagatgaaaaatgtc
acatttgaacatgtgaaaggggctgaggaggcaaagaatgagctgcaagaagttgtggag
ttcctgaagaacccccagaaatttactgtgcttggtggcaagctccctaaaggcatcctc
ttaattggacctccaggtactggcaaaacccttttagcccgtgcagtggccggtgaagcg
gatgtaccgttctattacgcctctgggtcagagtttgacgaaatgtttgttggagtagga
gccagtcgtatcagaaatcttttcaaggaggcaaaagcaaatgcaccttgtgttatattt
attgatgagcttgactctgttggtggaaaaagaattgagtctcctatgcatccatactcg
aggcagaccatcaatcagctgctggcagaaatggacgggttcaaaccaaatgaaggggtc
attattataggagcaactaactttccagaagcgttggacaacgcccttattcgtcctgga
cgatttgatatgcaggttacagtcccaaggccagatgtgaaaggtcggacagaaatcctg
aaatggtacctcaaaaaaatcaaagtggaccctgcaggcgttgatccagaaagaattgcc
agagggacagttggcttttctggagcagatctggaaaatctggtaaatcaggctgcactg
aaggccgcagtggatgaaaaggacatggtgaccatggaggatttggaatttgccaaggac
aagatccttatgggtccagaacgcagaagtgttgagatagacaagagaaacaaaaccatc
accgcataccatgaatctggtcatgccattgttgctttttataccaaagatgctatgccc
atcaataaagccacaataatgcccagaggacctacacttggacatgtgtctttgcttcca
gagaatgacagatggagtgaaaccagatctcagttactggcccaaatggatgtcagtatg
gggggacgggtagccgaagaacttatatttggcaatgaaaacatcaccacaggcaagtca
gcaatgttttactgcatcagcaaaaaaggtgcatcaagtgattttgataatgcaaccaaa
attgcaaagatgatggtgactaaatttggaatgagtgaaaagcttggcgtcatgacatat
actgacacggctaaactcagcccagaaacccaagctgccattgaacaagaagttaggata
ctcttaaaggactcctatgaacgagcaaaacacatcctgaagagtcgttcaaaagaacac
aagtacttggctgatgctttgttgacttatgagactctgaatgccaaagagattcaaatc
atcctggatggaaagaatctggaaccgagatga
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