KEGG   Polyodon spathula (Mississippi paddlefish): 121312714
Entry
121312714         CDS       T07273                                 
Name
(RefSeq) charged multivesicular body protein 4c-like
  KO
K24782  charged multivesicular body protein 4C
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144  Endocytosis
pspa04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121312714
  09143 Cell growth and death
   04217 Necroptosis
    121312714
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pspa04131]
    121312714
   03400 DNA repair and recombination proteins [BR:pspa03400]
    121312714
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pspa04147]
    121312714
Membrane trafficking [BR:pspa04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    121312714
DNA repair and recombination proteins [BR:pspa03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    121312714
Exosome [BR:pspa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121312714
  Exosomal proteins of colorectal cancer cells
   121312714
SSDB
Motif
Pfam: Snf7 eIF-5_eIF-2B Neur_chan_memb
Other DBs
NCBI-GeneID: 121312714
NCBI-ProteinID: XP_041100349
LinkDB
Position
3:complement(10887650..10895448)
AA seq 219 aa
MSKISKFFKVGSTSKNQGPTPQEAIHKLRETEEMLTKKQEYLENRIQQELVTAKKHGTKN
KRAALQALKRKKRFEQQLSQIDGTISTIEFQREALENANTNTEVLKNMGYAAKAIKGAHE
NMDLDKIDSLMQDITEQQDVAQEISDAISRPVGFGEQYDEDELLAELEELEQEELDQNMV
SMGGLPSVPSASLPSRPVSKKKVDVNDDLDMEQLAAWAT
NT seq 660 nt   +upstreamnt  +downstreamnt
atgagtaaaatttccaagtttttcaaagtagggtcgacttcgaaaaaccaaggtccgacc
ccacaagaggcgattcacaaactcagggagactgaggaaatgctaactaaaaaacaggag
tacctggaaaatagaatacaacaagagctagtcactgctaaaaagcacggtaccaagaat
aaaagagctgctttacaggcactaaaacgaaaaaagagattcgagcagcagctgtctcag
attgatggaacaatttctaccatcgaattccagagagaagcgttggagaatgcaaacaca
aatacagaagtgttgaagaatatgggatatgcagctaaagccattaaaggagctcatgag
aacatggacttggataaaattgattcgcttatgcaggacattactgagcagcaagatgtt
gcacaagaaatctcagacgccatctcccgaccagttggatttggggagcaatatgatgag
gatgagctgctggctgagctggaggagttggaacaggaggaacttgaccagaacatggtt
agcatgggaggactgcccagtgttccatcagcatctctgccatctaggccagtttccaag
aagaaggtggatgttaatgacgaccttgacatggaacagctggcagcctgggcaacataa

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